Miyakogusa Predicted Gene

Lj2g3v0916180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0916180.1 tr|B9I8E0|B9I8E0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_807105 PE=4 SV=1,65.96,1e-17,
,CUFF.35730.1
         (125 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g00860.1                                                       132   1e-31
Glyma05g09300.2                                                       123   4e-29
Glyma19g00860.2                                                       122   8e-29
Glyma05g09300.1                                                       119   8e-28

>Glyma19g00860.1 
          Length = 125

 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 68/125 (54%), Positives = 76/125 (60%)

Query: 1   MAKFNVVQXXXXXXXXXXXXXIHGDPTTGKLKVRTQPQSLSGKRKRKLFNYWRREQKEAL 60
           MAKFNVVQ             +HGDP TGKLK++ QP SLSGKRKRKLF  WRR+QK+AL
Sbjct: 1   MAKFNVVQKKRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61  QNGVVTMEDVQMAVAEGATKDAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAADISA 120
           QNG+VTMEDVQMAVAEG TKDAP                              PAAD+SA
Sbjct: 61  QNGLVTMEDVQMAVAEGDTKDAPRPSAKIHLKKKTLKLKQLKRKGKNKRKSDVPAADVSA 120

Query: 121 NAMVE 125
           +AMVE
Sbjct: 121 DAMVE 125


>Glyma05g09300.2 
          Length = 124

 Score =  123 bits (309), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 66/125 (52%), Positives = 74/125 (59%), Gaps = 1/125 (0%)

Query: 1   MAKFNVVQXXXXXXXXXXXXXIHGDPTTGKLKVRTQPQSLSGKRKRKLFNYWRREQKEAL 60
           MAKFNVVQ             +HGDP TGKLK++ QP SLSGKRKRKLF  WRR+QK+AL
Sbjct: 1   MAKFNVVQKRRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61  QNGVVTMEDVQMAVAEGATKDAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAADISA 120
           QNG+VTMEDVQMAVAEG TKD P                              P AD+SA
Sbjct: 61  QNGLVTMEDVQMAVAEGDTKDTPRPSPKIHLKKKALKLKQLKRKGKNKRKSDVP-ADVSA 119

Query: 121 NAMVE 125
           +AMVE
Sbjct: 120 DAMVE 124


>Glyma19g00860.2 
          Length = 110

 Score =  122 bits (306), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 58/83 (69%), Positives = 64/83 (77%)

Query: 1  MAKFNVVQXXXXXXXXXXXXXIHGDPTTGKLKVRTQPQSLSGKRKRKLFNYWRREQKEAL 60
          MAKFNVVQ             +HGDP TGKLK++ QP SLSGKRKRKLF  WRR+QK+AL
Sbjct: 1  MAKFNVVQKKRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61 QNGVVTMEDVQMAVAEGATKDAP 83
          QNG+VTMEDVQMAVAEG TKDAP
Sbjct: 61 QNGLVTMEDVQMAVAEGDTKDAP 83


>Glyma05g09300.1 
          Length = 125

 Score =  119 bits (297), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 66/126 (52%), Positives = 74/126 (58%), Gaps = 2/126 (1%)

Query: 1   MAKFNVVQXXXXXXXXXXXXXIHGDPTTGKLKVRTQPQSLSGKRKRKLFNYWRREQKEAL 60
           MAKFNVVQ             +HGDP TGKLK++ QP SLSGKRKRKLF  WRR+QK+AL
Sbjct: 1   MAKFNVVQKRRRALIAEKKRQLHGDPLTGKLKIKDQPLSLSGKRKRKLFKKWRRDQKDAL 60

Query: 61  QNGVVTMEDVQMAVAE-GATKDAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAADIS 119
           QNG+VTMEDVQMAVAE G TKD P                              P AD+S
Sbjct: 61  QNGLVTMEDVQMAVAEAGDTKDTPRPSPKIHLKKKALKLKQLKRKGKNKRKSDVP-ADVS 119

Query: 120 ANAMVE 125
           A+AMVE
Sbjct: 120 ADAMVE 125