Miyakogusa Predicted Gene

Lj2g3v0912030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0912030.1 Non Chatacterized Hit- tr|B9RK95|B9RK95_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,53.85,5e-18,seg,NULL; PRA1,Prenylated rab acceptor PRA1; PRENYLATED
RAB ACCEPTOR 1-RELATED,NULL,CUFF.35660.1
         (91 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g00580.1                                                       110   3e-25
Glyma07g15530.1                                                       102   9e-23
Glyma15g02700.1                                                        60   5e-10
Glyma13g42730.1                                                        60   5e-10
Glyma07g01320.1                                                        53   7e-08
Glyma08g20720.1                                                        50   7e-07

>Glyma01g00580.1 
          Length = 180

 Score =  110 bits (275), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/91 (61%), Positives = 63/91 (69%)

Query: 1  MTTYGTISEESEVLSDSNPFLSQVTKDRIEAGLGTTRPWKEMIQPSHFKLPPSFFGAIQR 60
          MTTYGTISEE+E  S+SN       K+ I+ GLGT RPW+EM+Q SHFK P SFFGAIQR
Sbjct: 1  MTTYGTISEEAEPSSNSNSVFVSQAKEHIQGGLGTRRPWREMLQTSHFKFPSSFFGAIQR 60

Query: 61 VNTNAKHFRANYXXXXXXXXXXXXXGHPISL 91
          +NTNAKHFRANY             GHPISL
Sbjct: 61 INTNAKHFRANYVIIILLVLFLSLLGHPISL 91


>Glyma07g15530.1 
          Length = 178

 Score =  102 bits (254), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 56/91 (61%), Positives = 61/91 (67%), Gaps = 2/91 (2%)

Query: 1  MTTYGTISEESEVLSDSNPFLSQVTKDRIEAGLGTTRPWKEMIQPSHFKLPPSFFGAIQR 60
          MTTYGTISEE+   S+S        K+RIE GLGTTRPW EM+Q  H KLP SFFGAIQR
Sbjct: 1  MTTYGTISEEASSNSNSVFVSQ--AKERIEDGLGTTRPWSEMLQTCHLKLPSSFFGAIQR 58

Query: 61 VNTNAKHFRANYXXXXXXXXXXXXXGHPISL 91
          +NTNAKHFRANY             GHPISL
Sbjct: 59 INTNAKHFRANYVIIILLVLFLSLLGHPISL 89


>Glyma15g02700.1 
          Length = 184

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 1  MTTYGTISEESEVLSDSNPFLSQVTKDRIEAGLGTTRPWKEMIQPSHFKLPPSFFGAIQR 60
          MT YGTI   S   S +  F+S+  K R++ GLGT RPWK M     F LP     A+ R
Sbjct: 1  MTNYGTIPTSSTP-STNLEFISR-AKQRVKEGLGTRRPWKLMFNFRSFALPAGVGDAVSR 58

Query: 61 VNTNAKHFRANYXXXXXXXXXXXXXGHPISL 91
          V  N  +F+ NY              HPISL
Sbjct: 59 VRENISYFQMNYAIVVLIVLFLSLLWHPISL 89


>Glyma13g42730.1 
          Length = 184

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 1  MTTYGTISEESEVLSDSNPFLSQVTKDRIEAGLGTTRPWKEMIQPSHFKLPPSFFGAIQR 60
          MT YGTI   S   S +  F+S+  K R++ GLGT RPWK M     F LP     A+ R
Sbjct: 1  MTNYGTIPTSSSP-STNLDFISR-AKQRVKEGLGTRRPWKLMFNFRSFGLPAGVGDAVAR 58

Query: 61 VNTNAKHFRANYXXXXXXXXXXXXXGHPISL 91
          V  N  +F+ NY              HPISL
Sbjct: 59 VRENISYFQMNYAIVVLIVLFLSLLWHPISL 89


>Glyma07g01320.1 
          Length = 178

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 43/93 (46%), Gaps = 9/93 (9%)

Query: 2  TTYGTISEESEVLSDSNPFLSQVT--KDRIEAGLGTTRPWKEMIQPSHFKLPPSFF-GAI 58
          TTYGTI       +   P L  ++  K RI+AGLGT RPWK M      K+P      A+
Sbjct: 3  TTYGTIP------TSPPPNLEYISRAKQRIKAGLGTRRPWKAMFNFRSLKVPGGGVPEAL 56

Query: 59 QRVNTNAKHFRANYXXXXXXXXXXXXXGHPISL 91
           R+  N  +FR NY              HPISL
Sbjct: 57 SRIRINVSYFRMNYAMVTLLILFLSLLWHPISL 89


>Glyma08g20720.1 
          Length = 176

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 25 TKDRIEAGLGTTRPWKEMIQPSHFKLPPSFF-GAIQRVNTNAKHFRANYXXXXXXXXXXX 83
           K RI+AGLG  RPWK M      K+P      A+ R+  N  +FR NY           
Sbjct: 23 AKQRIKAGLGMRRPWKAMFNFRSLKVPGGGLPEALSRIRINVSYFRMNYAMVALLILFLS 82

Query: 84 XXGHPISL 91
             HPISL
Sbjct: 83 LLWHPISL 90