Miyakogusa Predicted Gene

Lj2g3v0911970.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0911970.1 Non Chatacterized Hit- tr|C5WNN8|C5WNN8_SORBI
Putative uncharacterized protein Sb01g050590
OS=Sorghu,56,3e-19,Tetraspannin,Tetraspanin/Peripherin; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL,gene.g40220.t1.1
         (77 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g15490.1                                                       106   6e-24
Glyma08g03290.1                                                       105   1e-23
Glyma09g33780.1                                                        84   3e-17
Glyma01g02170.1                                                        81   3e-16
Glyma01g11130.1                                                        80   4e-16
Glyma13g40390.1                                                        57   4e-09
Glyma11g15790.1                                                        57   4e-09
Glyma20g31900.1                                                        54   4e-08
Glyma10g35650.1                                                        54   5e-08
Glyma17g07700.1                                                        53   7e-08
Glyma04g19880.1                                                        52   1e-07
Glyma16g26080.1                                                        52   1e-07
Glyma13g01580.1                                                        52   1e-07
Glyma12g07660.1                                                        52   1e-07
Glyma18g22790.1                                                        52   2e-07
Glyma17g09150.1                                                        52   2e-07
Glyma15g25180.1                                                        51   3e-07
Glyma02g07090.1                                                        51   3e-07

>Glyma07g15490.1 
          Length = 273

 Score =  106 bits (265), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 51/77 (66%), Positives = 56/77 (72%)

Query: 1   MADPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRKXXXXXXXXXXXXXXXXXXXCSAY 60
           M DPDCYLW+NDQ+QLCYNCNACKAGLLG LR+EWRK                   CSA+
Sbjct: 197 MVDPDCYLWSNDQSQLCYNCNACKAGLLGNLREEWRKANIILTVAVVVLIWVYLIACSAF 256

Query: 61  KNAKTEDLFRRYKRGWV 77
           KNA+TEDLFRRYKRGWV
Sbjct: 257 KNAQTEDLFRRYKRGWV 273


>Glyma08g03290.1 
          Length = 285

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/77 (64%), Positives = 55/77 (71%)

Query: 1   MADPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRKXXXXXXXXXXXXXXXXXXXCSAY 60
           MAD DCYLWNNDQNQLCYNCNACKAGLLG LRKEWRK                   CSA+
Sbjct: 209 MADSDCYLWNNDQNQLCYNCNACKAGLLGNLRKEWRKANIILIVAVVVLIWVYVIACSAF 268

Query: 61  KNAKTEDLFRRYKRGWV 77
           +NA+TE+LF RYK+GWV
Sbjct: 269 RNAQTENLFDRYKQGWV 285


>Glyma09g33780.1 
          Length = 269

 Score = 84.0 bits (206), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/75 (53%), Positives = 49/75 (65%)

Query: 2   ADPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRKXXXXXXXXXXXXXXXXXXXCSAYK 61
           AD DC  W+NDQ QLCYNC++CKAGLL  LRKEWR+                   C A++
Sbjct: 194 ADMDCLQWSNDQTQLCYNCDSCKAGLLANLRKEWRRANVILIITVIVLIIVYLVGCCAFR 253

Query: 62  NAKTEDLFRRYKRGW 76
           NAKTEDLFR+YK+G+
Sbjct: 254 NAKTEDLFRKYKQGY 268


>Glyma01g02170.1 
          Length = 163

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/76 (51%), Positives = 48/76 (63%)

Query: 2   ADPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRKXXXXXXXXXXXXXXXXXXXCSAYK 61
           AD DC  W+NDQ QLCYNC++CKAGLL  LRKEWR+                   C A++
Sbjct: 88  ADMDCLQWSNDQTQLCYNCDSCKAGLLANLRKEWRRANVILIITVIVLIIVYLVGCCAFR 147

Query: 62  NAKTEDLFRRYKRGWV 77
           N KTEDLFR+YK+G+ 
Sbjct: 148 NVKTEDLFRKYKQGYT 163


>Glyma01g11130.1 
          Length = 269

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/74 (50%), Positives = 47/74 (63%)

Query: 3   DPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRKXXXXXXXXXXXXXXXXXXXCSAYKN 62
           D DC  W+NDQ QLCYNC++CKAGLL  LR EWR+                   C A++N
Sbjct: 195 DMDCMKWSNDQAQLCYNCDSCKAGLLATLRVEWRRANVILIVTLVALIAVYLVGCFAFRN 254

Query: 63  AKTEDLFRRYKRGW 76
           AKTE+LFR+YK+G+
Sbjct: 255 AKTEELFRKYKQGY 268


>Glyma13g40390.1 
          Length = 282

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%)

Query: 2   ADPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRKXXXXXXXXXXXXXXXXXXXCSAYK 61
           ++PDC  W+NDQ+ LCY+C++CKAG+L  L+K WRK                    +AYK
Sbjct: 201 SNPDCTRWSNDQHLLCYDCDSCKAGVLATLKKSWRKVSVINIPVLVTLVVLYIIAYAAYK 260

Query: 62  N 62
           N
Sbjct: 261 N 261


>Glyma11g15790.1 
          Length = 285

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 29/36 (80%)

Query: 2   ADPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRK 37
           A+PDC  W+NDQ QLCY C++CKAG+L  L+K WRK
Sbjct: 200 ANPDCTRWSNDQEQLCYACDSCKAGVLASLKKSWRK 235


>Glyma20g31900.1 
          Length = 283

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/35 (60%), Positives = 25/35 (71%)

Query: 3   DPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRK 37
           DPDCY WNN  N LCY C++CKAG+L  +R  W K
Sbjct: 186 DPDCYRWNNAPNLLCYECDSCKAGVLEDIRGNWHK 220


>Glyma10g35650.1 
          Length = 283

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/35 (60%), Positives = 25/35 (71%)

Query: 3   DPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRK 37
           DPDCY WNN  N LCY C++CKAG+L  +R  W K
Sbjct: 186 DPDCYRWNNAPNLLCYECDSCKAGVLEDIRGNWHK 220


>Glyma17g07700.1 
          Length = 270

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 33/65 (50%)

Query: 3   DPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRKXXXXXXXXXXXXXXXXXXXCSAYKN 62
           +PDC  WNN+Q  LC+NC +CKAG L   + EW++                   C A++N
Sbjct: 200 NPDCDAWNNNQTVLCFNCQSCKAGFLQNFKTEWKRVAVVNIVFLVLLIIVYSIGCCAFRN 259

Query: 63  AKTED 67
            + E+
Sbjct: 260 NRREN 264


>Glyma04g19880.1 
          Length = 267

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 32/61 (52%)

Query: 2   ADPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRKXXXXXXXXXXXXXXXXXXXCSAYK 61
           ++PDC  W+ND N LC+NC +CKAG L  L+ +W+K                   C A++
Sbjct: 199 SNPDCNAWDNDSNVLCFNCESCKAGFLQNLKTDWKKVTIVNVIFLVFLIIVYSVGCCAFR 258

Query: 62  N 62
           N
Sbjct: 259 N 259


>Glyma16g26080.1 
          Length = 283

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 32/62 (51%)

Query: 3   DPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRKXXXXXXXXXXXXXXXXXXXCSAYKN 62
           D DCY WNN    LCY+CN+CKAG+L  +R++W                     C A++N
Sbjct: 186 DSDCYRWNNAPTLLCYDCNSCKAGVLENIRRDWHNISVLNVVVLVFLIGIYSIACCAFRN 245

Query: 63  AK 64
           A+
Sbjct: 246 AR 247


>Glyma13g01580.1 
          Length = 296

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 2   ADPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRKXXXXXXXXXXXXXXXXXXXCSAYK 61
           ++PDC  WNND   LC+NC +CKAGLL  L+ +W++                   C A++
Sbjct: 225 SNPDCDAWNNDPTVLCFNCQSCKAGLLQNLKTDWKRVAVVNIVFLVFLIIVYSIGCCAFR 284

Query: 62  NAKTEDLFRRYKR 74
           N + E+ ++ Y R
Sbjct: 285 NNRREN-WKGYSR 296


>Glyma12g07660.1 
          Length = 285

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 2   ADPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRK 37
            + DC  W+NDQ QLCY C++CKAG+L  L+K WRK
Sbjct: 200 TNADCTRWSNDQEQLCYACDSCKAGVLASLKKSWRK 235


>Glyma18g22790.1 
          Length = 280

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/34 (50%), Positives = 26/34 (76%)

Query: 3   DPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWR 36
           D DC  W+N Q++LC+NC++CK G+L  +R +WR
Sbjct: 194 DTDCRTWSNRQDKLCFNCDSCKGGVLANIRSQWR 227


>Glyma17g09150.1 
          Length = 274

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/35 (48%), Positives = 26/35 (74%)

Query: 3   DPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWRK 37
           + DC  WNN + +LCY+CN+CK G+L  +R +WR+
Sbjct: 200 NTDCSTWNNSKEKLCYDCNSCKGGVLANIRNQWRR 234


>Glyma15g25180.1 
          Length = 273

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/34 (50%), Positives = 26/34 (76%)

Query: 3   DPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEWR 36
           D DC  W+N Q++LC+NC++CK G+L  +R +WR
Sbjct: 212 DTDCRTWSNRQDKLCFNCDSCKGGVLANIRSQWR 245


>Glyma02g07090.1 
          Length = 283

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/33 (57%), Positives = 25/33 (75%)

Query: 3   DPDCYLWNNDQNQLCYNCNACKAGLLGKLRKEW 35
           DPDCY WNN    LCY+C++CKAG+L  +R+ W
Sbjct: 186 DPDCYRWNNAPTLLCYDCDSCKAGVLENIRRGW 218