Miyakogusa Predicted Gene

Lj2g3v0911640.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0911640.1 tr|G7KJ91|G7KJ91_MEDTR Mitochondrial substrate
carrier family protein P OS=Medicago truncatula
GN=MT,81.58,0.0000000003,MITOCARRIER,Mitochondrial carrier protein;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; Mito_car,CUFF.35635.1
         (53 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g15430.1                                                        63   8e-11
Glyma04g05530.1                                                        57   6e-09
Glyma06g05550.1                                                        53   6e-08

>Glyma07g15430.1 
          Length = 323

 Score = 62.8 bits (151), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/37 (78%), Positives = 35/37 (94%)

Query: 16 LLDHVPVFAKELLAGGIAGGFAKSVVAPLERVKILLQ 52
          ++D +P+FAKELLAGG+AGGFAK+VVAPLERVKIL Q
Sbjct: 13 VVDLMPLFAKELLAGGVAGGFAKTVVAPLERVKILFQ 49


>Glyma04g05530.1 
          Length = 339

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 30/42 (71%)

Query: 11 QNNAVLLDHVPVFAKELLAGGIAGGFAKSVVAPLERVKILLQ 52
          Q N    D VPV+ KEL+AGG AG  +K+ VAPLERVKIL Q
Sbjct: 19 QRNETSFDGVPVYVKELIAGGFAGALSKTTVAPLERVKILWQ 60


>Glyma06g05550.1 
          Length = 338

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/42 (59%), Positives = 30/42 (71%)

Query: 11 QNNAVLLDHVPVFAKELLAGGIAGGFAKSVVAPLERVKILLQ 52
          + N    D VPV+ KEL+AGG AG  +K+ VAPLERVKIL Q
Sbjct: 19 KRNESSFDGVPVYVKELIAGGFAGALSKTSVAPLERVKILWQ 60