Miyakogusa Predicted Gene

Lj2g3v0907490.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0907490.1 Non Chatacterized Hit- tr|I1J4P3|I1J4P3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,40.45,0.0001,
,CUFF.35619.1
         (89 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g01650.1                                                        51   3e-07

>Glyma01g01650.1 
          Length = 269

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 41/89 (46%), Gaps = 42/89 (47%)

Query: 1  MSLLYSTATTNQLLLWRRIRCITTEQSTLQSNTTSSEKLRHQKRFSSSTAELNIKSQIYS 60
          MSLL STATTNQ L WRRI+                                        
Sbjct: 26 MSLLKSTATTNQQLQWRRIQ---------------------------------------- 45

Query: 61 RRRYRDQDLKNYELHLELEKFASRRSVEM 89
            R RDQDLKNY+L+ E +KFASRRSVE+
Sbjct: 46 --RCRDQDLKNYDLYSESQKFASRRSVEI 72