Miyakogusa Predicted Gene

Lj2g3v0878910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0878910.1 Non Chatacterized Hit- tr|I1N992|I1N992_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,93.1,0.0000002,seg,NULL,
gene.Ljchr2_pseudomol_20120830.path1.gene2582.1
         (59 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g33030.1                                                        59   1e-09
Glyma03g30140.1                                                        58   3e-09

>Glyma19g33030.1 
          Length = 363

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/29 (93%), Positives = 28/29 (96%)

Query: 31  YLIVSAVTNLFVNLIVVWFFRNYARINLA 59
           YLIVSAVTNLFVNL+ VWFFRNYARINLA
Sbjct: 186 YLIVSAVTNLFVNLVGVWFFRNYARINLA 214


>Glyma03g30140.1 
          Length = 367

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/28 (92%), Positives = 27/28 (96%)

Query: 31  YLIVSAVTNLFVNLIVVWFFRNYARINL 58
           YLIVSAVTNLFVNL+ VWFFRNYARINL
Sbjct: 190 YLIVSAVTNLFVNLVGVWFFRNYARINL 217