Miyakogusa Predicted Gene

Lj2g3v0866680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0866680.1 Non Chatacterized Hit- tr|I3S499|I3S499_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.3,0,BRCT
domain,BRCT domain; no description,NULL; PTCB-BRCT,NULL; SUBFAMILY NOT
NAMED,NULL; DNA REPLICAT,NODE_73372_length_2005_cov_28.246384.path2.1
         (529 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g06070.1                                                       881   0.0  
Glyma06g06070.2                                                       872   0.0  
Glyma17g30500.1                                                       217   2e-56
Glyma04g06070.1                                                       154   2e-37
Glyma12g13010.1                                                        78   3e-14

>Glyma06g06070.1 
          Length = 539

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/539 (82%), Positives = 473/539 (87%), Gaps = 10/539 (1%)

Query: 1   MGGDGIVEVVGGKGCSRLFSSS---FRGLQPMEXXXXXXXX-XXXXXXXPFAGLVICVTG 56
           MGGDG VEVV GKGCSRLFSSS   FRGLQP+E                PFAGLVICVTG
Sbjct: 1   MGGDGRVEVVSGKGCSRLFSSSIPSFRGLQPLEPMSPASSPLQVPSSTAPFAGLVICVTG 60

Query: 57  LSKETRNQVREATERLGGQYSSNLHPQCTHLVVQSFGGRKLEHALKHGAKNGLLVVTLGW 116
           LSKE RNQV EATERLGGQYS NLHPQCTHLVVQSFGGRK EHALKHGAKNGL VVTLGW
Sbjct: 61  LSKEARNQVMEATERLGGQYSPNLHPQCTHLVVQSFGGRKFEHALKHGAKNGLFVVTLGW 120

Query: 117 FVDSVRKNVRLTESHYSVKSYGDNNMRLVDFKLLTRYTEAENYCLPARIHETKHAHSVEE 176
           FVDSVRK VRL+ESHY VKSYGDNN RL DF+LL  Y  AEN C PARIH++  A+SVEE
Sbjct: 121 FVDSVRKTVRLSESHYRVKSYGDNNTRLEDFRLLPEYRNAENSCFPARIHQSNQANSVEE 180

Query: 177 IQRFSGRES------TLSGCSIYVDPGISSELCTKVVETASREGARLVEQWFVGCNVSHV 230
           +QRF+GRES      TLSGCSIYVDPGISSEL  KV+ETASREGA LVEQWFVGC+VSHV
Sbjct: 181 LQRFTGRESNRNSDSTLSGCSIYVDPGISSELRNKVIETASREGASLVEQWFVGCSVSHV 240

Query: 231 VTEGTSIQRYLGYSSNLVTPLWILKTAKEKNVQRLVHMSADLAKQVGLMLEDINNGISGK 290
           VTEGTSIQRYLGYSSNL+TPLWILKTAKEK V++LVHMS DLAKQVGLMLEDI+N ISGK
Sbjct: 241 VTEGTSIQRYLGYSSNLITPLWILKTAKEKYVRKLVHMSVDLAKQVGLMLEDIHNDISGK 300

Query: 291 EVIKQKVHGDLQGSKSEVSYKERQQIVNSAKIGVRNRRGRRMQTCQTPIRHITPNNILDS 350
           EVIKQKV  +L  ++SEVSY+ERQQIVNSAK GVRNRRGRRMQTCQTPIR ITPNN+LDS
Sbjct: 301 EVIKQKVLNNLPDTESEVSYEERQQIVNSAKNGVRNRRGRRMQTCQTPIRPITPNNLLDS 360

Query: 351 ISWTISEPNSTASIYTDSFSVEDPSENCNSIFFESKGDGKDSEASFANSTRPLTESEKSE 410
           I W+ISEP STASIYTDSFSVEDPSEN  SIFF++KGDGKDSEASF+NSTRPLTESEKSE
Sbjct: 361 ICWSISEPTSTASIYTDSFSVEDPSENHTSIFFDAKGDGKDSEASFSNSTRPLTESEKSE 420

Query: 411 LIFKNHFLTILFPIDRFSEMGPSSRTFFSHSGFTCLQVLDHIQAFNQENMSSQEIEAAIH 470
           LIFKNHFLTIL PIDRF+EMGPSSRTFFSH+GFTCLQVLDHI+AF QENMS QEIEAAIH
Sbjct: 421 LIFKNHFLTILLPIDRFAEMGPSSRTFFSHNGFTCLQVLDHIRAFYQENMSRQEIEAAIH 480

Query: 471 TDSRHADRLRSVYSSKETAEHGCVMFKRIEFIGSRTSFEMLKRVAGDNNSNVYELLLRA 529
           +DSRHADRLRSVYSSKETAE G VMFKR+EF+GSRTSFEMLKRV GDNNSNVYELLLRA
Sbjct: 481 SDSRHADRLRSVYSSKETAESGYVMFKRVEFLGSRTSFEMLKRVTGDNNSNVYELLLRA 539


>Glyma06g06070.2 
          Length = 538

 Score =  872 bits (2254), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/539 (82%), Positives = 471/539 (87%), Gaps = 11/539 (2%)

Query: 1   MGGDGIVEVVGGKGCSRLFSSS---FRGLQPMEXXXXXXXX-XXXXXXXPFAGLVICVTG 56
           MGGDG VEVV GKGCSRLFSSS   FRGLQP+E                PFAGLVICVTG
Sbjct: 1   MGGDGRVEVVSGKGCSRLFSSSIPSFRGLQPLEPMSPASSPLQVPSSTAPFAGLVICVTG 60

Query: 57  LSKETRNQVREATERLGGQYSSNLHPQCTHLVVQSFGGRKLEHALKHGAKNGLLVVTLGW 116
           LSKE RNQV EATERLGGQYS NLHPQCTHLV  SFGGRK EHALKHGAKNGL VVTLGW
Sbjct: 61  LSKEARNQVMEATERLGGQYSPNLHPQCTHLVY-SFGGRKFEHALKHGAKNGLFVVTLGW 119

Query: 117 FVDSVRKNVRLTESHYSVKSYGDNNMRLVDFKLLTRYTEAENYCLPARIHETKHAHSVEE 176
           FVDSVRK VRL+ESHY VKSYGDNN RL DF+LL  Y  AEN C PARIH++  A+SVEE
Sbjct: 120 FVDSVRKTVRLSESHYRVKSYGDNNTRLEDFRLLPEYRNAENSCFPARIHQSNQANSVEE 179

Query: 177 IQRFSGRES------TLSGCSIYVDPGISSELCTKVVETASREGARLVEQWFVGCNVSHV 230
           +QRF+GRES      TLSGCSIYVDPGISSEL  KV+ETASREGA LVEQWFVGC+VSHV
Sbjct: 180 LQRFTGRESNRNSDSTLSGCSIYVDPGISSELRNKVIETASREGASLVEQWFVGCSVSHV 239

Query: 231 VTEGTSIQRYLGYSSNLVTPLWILKTAKEKNVQRLVHMSADLAKQVGLMLEDINNGISGK 290
           VTEGTSIQRYLGYSSNL+TPLWILKTAKEK V++LVHMS DLAKQVGLMLEDI+N ISGK
Sbjct: 240 VTEGTSIQRYLGYSSNLITPLWILKTAKEKYVRKLVHMSVDLAKQVGLMLEDIHNDISGK 299

Query: 291 EVIKQKVHGDLQGSKSEVSYKERQQIVNSAKIGVRNRRGRRMQTCQTPIRHITPNNILDS 350
           EVIKQKV  +L  ++SEVSY+ERQQIVNSAK GVRNRRGRRMQTCQTPIR ITPNN+LDS
Sbjct: 300 EVIKQKVLNNLPDTESEVSYEERQQIVNSAKNGVRNRRGRRMQTCQTPIRPITPNNLLDS 359

Query: 351 ISWTISEPNSTASIYTDSFSVEDPSENCNSIFFESKGDGKDSEASFANSTRPLTESEKSE 410
           I W+ISEP STASIYTDSFSVEDPSEN  SIFF++KGDGKDSEASF+NSTRPLTESEKSE
Sbjct: 360 ICWSISEPTSTASIYTDSFSVEDPSENHTSIFFDAKGDGKDSEASFSNSTRPLTESEKSE 419

Query: 411 LIFKNHFLTILFPIDRFSEMGPSSRTFFSHSGFTCLQVLDHIQAFNQENMSSQEIEAAIH 470
           LIFKNHFLTIL PIDRF+EMGPSSRTFFSH+GFTCLQVLDHI+AF QENMS QEIEAAIH
Sbjct: 420 LIFKNHFLTILLPIDRFAEMGPSSRTFFSHNGFTCLQVLDHIRAFYQENMSRQEIEAAIH 479

Query: 471 TDSRHADRLRSVYSSKETAEHGCVMFKRIEFIGSRTSFEMLKRVAGDNNSNVYELLLRA 529
           +DSRHADRLRSVYSSKETAE G VMFKR+EF+GSRTSFEMLKRV GDNNSNVYELLLRA
Sbjct: 480 SDSRHADRLRSVYSSKETAESGYVMFKRVEFLGSRTSFEMLKRVTGDNNSNVYELLLRA 538


>Glyma17g30500.1 
          Length = 215

 Score =  217 bits (553), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 104/127 (81%), Positives = 117/127 (92%)

Query: 357 EPNSTASIYTDSFSVEDPSENCNSIFFESKGDGKDSEASFANSTRPLTESEKSELIFKNH 416
           E  +  SIYTDSFSV+DPSEN  SIFF++KGDGKDSEASF+NSTRPLTESEKSELIFKNH
Sbjct: 57  ENYTDTSIYTDSFSVDDPSENHTSIFFDAKGDGKDSEASFSNSTRPLTESEKSELIFKNH 116

Query: 417 FLTILFPIDRFSEMGPSSRTFFSHSGFTCLQVLDHIQAFNQENMSSQEIEAAIHTDSRHA 476
           FLTIL PI+RF+EMGPSSRTFFSH+GFTCLQVLDHI+AF QENMS QEI AAIH+DSRHA
Sbjct: 117 FLTILLPINRFAEMGPSSRTFFSHNGFTCLQVLDHIRAFYQENMSRQEIGAAIHSDSRHA 176

Query: 477 DRLRSVY 483
           DR+RS++
Sbjct: 177 DRIRSMF 183


>Glyma04g06070.1 
          Length = 96

 Score =  154 bits (390), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 71/79 (89%), Positives = 74/79 (93%)

Query: 46  PFAGLVICVTGLSKETRNQVREATERLGGQYSSNLHPQCTHLVVQSFGGRKLEHALKHGA 105
           PFAGLVICVTGLSKE RNQV EAT+RLGGQYS NLHP+CTHLVVQSFGGRK EHALKHGA
Sbjct: 16  PFAGLVICVTGLSKEARNQVMEATDRLGGQYSPNLHPRCTHLVVQSFGGRKFEHALKHGA 75

Query: 106 KNGLLVVTLGWFVDSVRKN 124
           KNGL VVTLGWFVDSVRK+
Sbjct: 76  KNGLFVVTLGWFVDSVRKS 94


>Glyma12g13010.1 
          Length = 134

 Score = 77.8 bits (190), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/39 (87%), Positives = 37/39 (94%)

Query: 206 VVETASREGARLVEQWFVGCNVSHVVTEGTSIQRYLGYS 244
           ++ TASREGA LVEQWFVGCNVSHVVT+GTSIQRYLGYS
Sbjct: 38  LLHTASREGASLVEQWFVGCNVSHVVTKGTSIQRYLGYS 76