Miyakogusa Predicted Gene

Lj2g3v0855190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0855190.1 tr|A9TAH7|A9TAH7_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_193120,41.24,3e-16, ,CUFF.35557.1
         (166 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03760.1                                                       245   1e-65
Glyma05g35860.1                                                       244   4e-65
Glyma01g01130.1                                                       225   1e-59
Glyma16g08510.1                                                       211   3e-55

>Glyma08g03760.1 
          Length = 524

 Score =  245 bits (626), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 126/165 (76%), Positives = 141/165 (85%), Gaps = 1/165 (0%)

Query: 1   MIQVAATLRFHLKGYSLEDMTYTSGGLSLVYFLATCTLVELFSMWNLTRIEVLLCNILSP 60
           MI VAA LRF+ KG+S E++ YTSGGLSLV FLA CTLVEL SMWNLTRIEV LCN+LSP
Sbjct: 357 MIHVAAALRFYYKGFSPEEIAYTSGGLSLVTFLAICTLVELLSMWNLTRIEVQLCNMLSP 416

Query: 61  EATPLSLATYNWFLVFIAMLVDNFLYPLSAIRSHFSQSINWSGIRYYLKEGKVSKIERTP 120
           EA  LSLA+YNW LVFIAMLVDNFLYP+SA RSHFSQSINWSGIRYYLK+GK+SKIERTP
Sbjct: 417 EAPQLSLASYNWCLVFIAMLVDNFLYPVSAFRSHFSQSINWSGIRYYLKDGKISKIERTP 476

Query: 121 RREDVEPVYTDLSGKHLYGMKGLNTKGSIIRSLSRSFVR-RQPKK 164
           R +D+ PV+TDL GKHLYG KGL T+GS + SLSRS  +  QPKK
Sbjct: 477 RSKDMGPVFTDLGGKHLYGKKGLPTRGSFLSSLSRSLAQWHQPKK 521


>Glyma05g35860.1 
          Length = 473

 Score =  244 bits (622), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 125/165 (75%), Positives = 140/165 (84%), Gaps = 1/165 (0%)

Query: 1   MIQVAATLRFHLKGYSLEDMTYTSGGLSLVYFLATCTLVELFSMWNLTRIEVLLCNILSP 60
           MI VAA +RF+ KG+S E+M YTSGGLSLV FLA CTLVEL SMWNLTRIEV LCN+LSP
Sbjct: 306 MIHVAAAVRFYYKGFSPEEMAYTSGGLSLVAFLAICTLVELLSMWNLTRIEVQLCNMLSP 365

Query: 61  EATPLSLATYNWFLVFIAMLVDNFLYPLSAIRSHFSQSINWSGIRYYLKEGKVSKIERTP 120
           EA  L LA+YNW LVFIAMLVDNFLYP+SA RSHFSQSINWSGIRYYLK+GK+SKIERTP
Sbjct: 366 EAPQLFLASYNWCLVFIAMLVDNFLYPVSAFRSHFSQSINWSGIRYYLKDGKISKIERTP 425

Query: 121 RREDVEPVYTDLSGKHLYGMKGLNTKGSIIRSLSRSFVR-RQPKK 164
           R +D+ PV+TDL GKHLYG KGL T+GS + SLSRS  +  QPKK
Sbjct: 426 RSKDMGPVFTDLGGKHLYGKKGLPTRGSFLSSLSRSLAQWHQPKK 470


>Glyma01g01130.1 
          Length = 513

 Score =  225 bits (574), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 117/181 (64%), Positives = 137/181 (75%), Gaps = 15/181 (8%)

Query: 1   MIQVAATLRFHLK-------GYS--LEDMTYTSGG-----LSLVYFLATCTLVELFSMWN 46
           +I VAA LRF  +       GY    E +  +  G     L++V+ LATCTL+ LFSMWN
Sbjct: 333 VIHVAAALRFRAREMLTQNEGYCSIFEVLGNSCDGSLMLCLTMVWILATCTLISLFSMWN 392

Query: 47  LTRIEVLLCNILSPEATPLSLATYNWFLVFIAMLVDNFLYPLSAIRSHFSQSINWSGIRY 106
           LTRIEVLLCNILSPEA  LSLA+YNWF VF+AMLV NFLYP+SAIRSHF+QSINWSGI Y
Sbjct: 393 LTRIEVLLCNILSPEAPRLSLASYNWFKVFVAMLVGNFLYPISAIRSHFTQSINWSGIIY 452

Query: 107 YLKEGKVSKIERTPRREDVEPVYTDLSGKHLYGMKGLNTKGSIIRSLS-RSFVRRQPKKS 165
           +LK+GK++KI R PRR+DV PV+TDL GKHLYG KG+ TKGS + SLS R F  RQPKKS
Sbjct: 453 HLKDGKINKIHRIPRRQDVAPVFTDLGGKHLYGKKGMPTKGSFLSSLSKRLFQWRQPKKS 512

Query: 166 E 166
           E
Sbjct: 513 E 513


>Glyma16g08510.1 
          Length = 504

 Score =  211 bits (537), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 110/177 (62%), Positives = 132/177 (74%), Gaps = 16/177 (9%)

Query: 1   MIQVAATLRFHLKGY-----SLED-----MTYTSGGLSLVYFLATCTLVELFSMWNLTRI 50
           +I VAA LRF  + +      LE+     M Y S     + F ATCTL+ LFSMWNLTRI
Sbjct: 333 VIHVAAALRFRAREFVKRKRKLEETLIFWMNYLS-----LSFKATCTLISLFSMWNLTRI 387

Query: 51  EVLLCNILSPEATPLSLATYNWFLVFIAMLVDNFLYPLSAIRSHFSQSINWSGIRYYLKE 110
           EVLLCNILSPEA  LSL +YNWF VFIAMLV NFLYP+SA+RSHF+QSINWSGI Y+LK+
Sbjct: 388 EVLLCNILSPEAPRLSLTSYNWFKVFIAMLVGNFLYPISAVRSHFTQSINWSGIIYHLKD 447

Query: 111 GKVSKIERTPRREDVEPVYTDLSGKHLYGMKGLNTKGSIIRSLS-RSFVRRQPKKSE 166
           GK++KI+R P+R+DV PV+TDL GKHLYG KG+ TK S + S++ R F  RQPKK E
Sbjct: 448 GKINKIDRIPKRQDVAPVFTDLGGKHLYGKKGMPTKVSFLSSMNKRLFQWRQPKKFE 504