Miyakogusa Predicted Gene

Lj2g3v0854130.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0854130.1 Non Chatacterized Hit- tr|I1MM17|I1MM17_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21174
PE,77.18,0,MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT
TIM-17,NULL; seg,NULL; Tim17,Mitochondrial i,CUFF.35554.1
         (206 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g08520.2                                                       287   5e-78
Glyma16g08520.1                                                       287   5e-78
Glyma01g01110.1                                                       287   6e-78
Glyma20g02120.1                                                       284   5e-77

>Glyma16g08520.2 
          Length = 200

 Score =  287 bits (735), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 146/206 (70%), Positives = 159/206 (77%), Gaps = 6/206 (2%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPNGQRFLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHFLKGL+NSP G RF+GA+QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGDRFVGATQAVRLNAP 60

Query: 61  RVGGSFAVWGGLFSACDCTLVYARQKEDPWNSILAGATTGGILAMRQGLRASARSAAFGG 120
           RVGGSFAVWGGLFSA DCT+VYARQKEDPWNSI+AGA TGG L+MRQGL ASARSAAFGG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYARQKEDPWNSIVAGAATGGFLSMRQGLGASARSAAFGG 120

Query: 121 VVLALIEGAGIALNKFISTQQPMPELMEEPVVATGFPSEDSASVGTSWLGGLLGRGKKED 180
           V+LALIEGAGI LNKF+S QQPMP +M+EP       SE        WLGG  G G +E+
Sbjct: 121 VLLALIEGAGIMLNKFLSAQQPMPMIMDEPQPQPPQSSEQ------PWLGGWFGGGNREE 174

Query: 181 PRESARSQTKILESFDAPPVPNFEYN 206
              S  S+TKILESFDAPPVPNFEY 
Sbjct: 175 TAGSGGSETKILESFDAPPVPNFEYK 200


>Glyma16g08520.1 
          Length = 200

 Score =  287 bits (735), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 146/206 (70%), Positives = 159/206 (77%), Gaps = 6/206 (2%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPNGQRFLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHFLKGL+NSP G RF+GA+QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGDRFVGATQAVRLNAP 60

Query: 61  RVGGSFAVWGGLFSACDCTLVYARQKEDPWNSILAGATTGGILAMRQGLRASARSAAFGG 120
           RVGGSFAVWGGLFSA DCT+VYARQKEDPWNSI+AGA TGG L+MRQGL ASARSAAFGG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYARQKEDPWNSIVAGAATGGFLSMRQGLGASARSAAFGG 120

Query: 121 VVLALIEGAGIALNKFISTQQPMPELMEEPVVATGFPSEDSASVGTSWLGGLLGRGKKED 180
           V+LALIEGAGI LNKF+S QQPMP +M+EP       SE        WLGG  G G +E+
Sbjct: 121 VLLALIEGAGIMLNKFLSAQQPMPMIMDEPQPQPPQSSEQ------PWLGGWFGGGNREE 174

Query: 181 PRESARSQTKILESFDAPPVPNFEYN 206
              S  S+TKILESFDAPPVPNFEY 
Sbjct: 175 TAGSGGSETKILESFDAPPVPNFEYK 200


>Glyma01g01110.1 
          Length = 200

 Score =  287 bits (734), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 147/208 (70%), Positives = 161/208 (77%), Gaps = 10/208 (4%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPNGQRFLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHFLKGL+NSP G RF+GA+QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGDRFVGATQAVRLNAP 60

Query: 61  RVGGSFAVWGGLFSACDCTLVYARQKEDPWNSILAGATTGGILAMRQGLRASARSAAFGG 120
           RVGGSFAVWGGLFSA DCT+VYARQKEDPWNSI+AGA TGG L+MRQGL ASARSAAFGG
Sbjct: 61  RVGGSFAVWGGLFSAFDCTMVYARQKEDPWNSIVAGAATGGFLSMRQGLGASARSAAFGG 120

Query: 121 VVLALIEGAGIALNKFISTQQPMPELMEEPVVATGFPSEDSASVGTSWLGGLLGRGKKED 180
           V+LALIEGAGI LNKF+S QQPMP +M+E       P + S     SWLGG  G G KE+
Sbjct: 121 VLLALIEGAGIMLNKFLSAQQPMPMIMDE------LPPQSSTE--QSWLGGWFGGGNKEE 172

Query: 181 PRESA--RSQTKILESFDAPPVPNFEYN 206
              +A   S+TKILESFDAPPVPNFEY 
Sbjct: 173 TATTAGSGSETKILESFDAPPVPNFEYK 200


>Glyma20g02120.1 
          Length = 213

 Score =  284 bits (726), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 143/213 (67%), Positives = 162/213 (76%), Gaps = 7/213 (3%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPNGQRFLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHFLKGL+N+P G R + ASQAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNAPRGARVVAASQAVRLNAP 60

Query: 61  RVGGSFAVWGGLFSACDCTLVYARQKEDPWNSILAGATTGGILAMRQGLRASARSAAFGG 120
           RVGGSFAVWGGLFS+ DCT+VY RQKEDPWNSI AGA TGG L+MRQGL A+ARSAAFGG
Sbjct: 61  RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGLPAAARSAAFGG 120

Query: 121 VVLALIEGAGIALNKFISTQQPMPELMEEPVVATGFPSEDSASV-----GTSWLGGLLGR 175
           V+LALIEGAGI LNKF+S QQPMP +++EP+   G P +  AS       +SWLGG  G 
Sbjct: 121 VLLALIEGAGIMLNKFLSAQQPMPMIVDEPLPPNGLPGQPVASAPDAASQSSWLGGWFGD 180

Query: 176 GKKEDPRESAR--SQTKILESFDAPPVPNFEYN 206
           GKK++    A   S+TK+LESFDAPPVPNFEY 
Sbjct: 181 GKKDEAAAEATGGSETKVLESFDAPPVPNFEYK 213