Miyakogusa Predicted Gene
- Lj2g3v0720150.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0720150.1 tr|Q9LS60|Q9LS60_ARATH Gb|AAF26481.1
OS=Arabidopsis thaliana GN=At3g18300 PE=2
SV=1,34.15,5e-19,seg,NULL,CUFF.35266.1
(239 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g31530.1 226 2e-59
Glyma07g10370.1 225 4e-59
Glyma05g34710.1 186 1e-47
Glyma08g04960.1 177 7e-45
Glyma20g25130.1 97 1e-20
Glyma10g41910.1 95 7e-20
Glyma08g48160.1 70 2e-12
Glyma13g07750.1 66 3e-11
Glyma19g06850.1 66 4e-11
Glyma06g15230.1 52 4e-07
>Glyma09g31530.1
Length = 246
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/249 (55%), Positives = 156/249 (62%), Gaps = 15/249 (6%)
Query: 3 MCSETSPPRLSFSHDLSELQVLPLIQDVHFRDTLLLDSNPXXXXXXXXXXXXXXXXADEL 62
MCSETSPPRLSFSHDLSELQVLP+ Q RDTLL DSN ADEL
Sbjct: 1 MCSETSPPRLSFSHDLSELQVLPMKQGAPCRDTLLHDSNSDFEFITSTDLEFESSSADEL 60
Query: 63 FSNGVILPTQIQDNKTTTPKHSHHVEXXXXXXXXXX-XXXVDKVKKETIRELMIDVSANG 121
FSNGVILP Q+Q+ KTT K +HHVE VDKVKKETIREL+ DV+++
Sbjct: 61 FSNGVILPIQMQE-KTTARKLTHHVESPHPKLPPRPCASSVDKVKKETIRELL-DVNSDN 118
Query: 122 ERK--KSSFWGFSRSKSLNCDDTKKIMVCPLPLLSRSNSMGSVAXXXXXXXXX------- 172
E+K SFWGF+RSKSLNC DTKK +VC PLLSRSNS GSV+
Sbjct: 119 EKKPHSKSFWGFNRSKSLNC-DTKKNLVCSSPLLSRSNSTGSVSNPKRVSSNKHPSAAKS 177
Query: 173 --XXXXXXXXXXXXXXXXXXGKTYGGSFGNGHWVSPVLNVPTPCVSKGSSNLFGLGSFLR 230
GK+YGGS+ NG ++PVLNVPTPCVSKGS+NL GLGSFLR
Sbjct: 178 SSSSYSFSTLNMYPMQKSPSGKSYGGSYPNGLRINPVLNVPTPCVSKGSANLLGLGSFLR 237
Query: 231 VGKVKRNKK 239
VGKVK++KK
Sbjct: 238 VGKVKKSKK 246
>Glyma07g10370.1
Length = 244
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 136/247 (55%), Positives = 155/247 (62%), Gaps = 13/247 (5%)
Query: 3 MCSETSPPRLSFSHDLSELQVLPLIQDVHFRDTLLLDSNPXXXXXXXXXXXXXXXXADEL 62
MCSET PPRLSFSHDLSELQVLP+ Q V DTLL DSN ADEL
Sbjct: 1 MCSETGPPRLSFSHDLSELQVLPMKQGVPCSDTLLHDSNSDFEFSTSTCLEFESSSADEL 60
Query: 63 FSNGVILPTQIQDNKTTTPKHSHHVEXXXXXXXXXX-XXXVDKVKKETIRELMIDVSANG 121
FSNGVILP Q+QD KTT K +HHV+ VDKVKKETIREL+ DV+ +
Sbjct: 61 FSNGVILPIQMQD-KTTARKLTHHVKYPHTKLPPRPCASSVDKVKKETIRELL-DVNPDH 118
Query: 122 ERK--KSSFWGFSRSKSLNCDDTKKIMVCPLPLLSRSNSMGSVAXXXXXXXXXXXXXXXX 179
E+K SFWGF+RSKSLNC DTKK +VC +PLLSRSNS GSVA
Sbjct: 119 EKKPHSKSFWGFNRSKSLNC-DTKKNLVCSIPLLSRSNSTGSVANPKRVSSNKHPSAAKS 177
Query: 180 XXXXXXX-------XXXXGKTYGGSFGNGHWVSPVLNVPTPCVSKGSSNLFGLGSFLRVG 232
GK+YGGS+ G ++PVLNVPTPCVSKGS++LFGLGSFLRVG
Sbjct: 178 SSYSFSTLNMYPMQKSPSGKSYGGSYPKGLRINPVLNVPTPCVSKGSAHLFGLGSFLRVG 237
Query: 233 KVKRNKK 239
KVK++KK
Sbjct: 238 KVKKSKK 244
>Glyma05g34710.1
Length = 239
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/248 (45%), Positives = 140/248 (56%), Gaps = 20/248 (8%)
Query: 3 MCSETSPPRLSFSHDLSELQVLPLIQDVHFRDTLLLDSN-PXXXXXXXXXXXXXXXXADE 61
MCS+ PPR SFSHD+ ELQ QDV +DT+LL+SN ADE
Sbjct: 1 MCSKIVPPRFSFSHDVPELQKQ---QDVPRKDTMLLESNHDFEFSTSRRSLEFESSSADE 57
Query: 62 LFSNGVILPTQIQDNKTTTPKHSHHVEXXXXXXXXX--XXXXVDKVKKETIRELMIDVSA 119
LFSNGVILP Q+Q + TT KH+ E VDK+KKE+ RE++
Sbjct: 58 LFSNGVILPIQMQKKRNTTRKHTLCGEAPYMRLPPLPCTPSSVDKIKKESTREVL----- 112
Query: 120 NGERKKSSFWGFSRSKSLNCDDTKKIMVCPLPLLSRSNSMGSVAXXXXXXXXXXXXXXXX 179
+ + +SFWGFSRSKSL+C DTKK ++C P LSRSNS GSV
Sbjct: 113 DKKAYSASFWGFSRSKSLSC-DTKKSLMCYSPPLSRSNSTGSVPQPKRVSSTRQHSAAKP 171
Query: 180 XXXXXX--------XXXXXGKTYGGSFGNGHWVSPVLNVPTPCVSKGSSNLFGLGSFLRV 231
GK+YGGS+ NG W+SPVLN+PTPC+SKGS +LFGLGSFLRV
Sbjct: 172 LSSSSSSTLNLYPIQRSRSGKSYGGSYANGLWISPVLNLPTPCISKGSGSLFGLGSFLRV 231
Query: 232 GKVKRNKK 239
GK K++KK
Sbjct: 232 GKAKKSKK 239
>Glyma08g04960.1
Length = 237
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/246 (45%), Positives = 140/246 (56%), Gaps = 18/246 (7%)
Query: 3 MCSETSPPRLSFSHDL-SELQVLPLIQDVHFRDTLLLDSN-PXXXXXXXXXXXXXXXXAD 60
MCS+ PPR SFSHD+ SELQ QDV +DT+LL+SN AD
Sbjct: 1 MCSKIVPPRFSFSHDVVSELQKQ---QDVPRKDTMLLESNHDFEFSTSRRSLEFESSSAD 57
Query: 61 ELFSNGVILPTQIQDNKTTTPKHSHHVEXXXXXXXXXXXXXVDKVKKETIRELMIDVSAN 120
ELFSNGVI+P Q+Q + TT KH+ + E VDK+KKE+ RE++ D
Sbjct: 58 ELFSNGVIVPIQMQKKRNTTRKHTLYGE-APYMRLPPLPSSVDKIKKESTREVLHDKKTY 116
Query: 121 GERKKSSFWGFSRSKSLNCDDTKKIMVCPLPLLSRSNSMGSVAXXXXXXXXXXXXXXXXX 180
+SFWGFSRSKSL+C DTKK ++C P LSRSNS GSV
Sbjct: 117 S----TSFWGFSRSKSLSC-DTKKSLMCYSPPLSRSNSAGSVPQPKRVSSTGHQAKPLSS 171
Query: 181 XXXXX------XXXXXGKTYGGSFGNGHWVSPVLNVPTPCVSKGS-SNLFGLGSFLRVGK 233
K+YGGS+ NG W+SPVLN+PTPC+SKGS ++LFGLGSFLRVGK
Sbjct: 172 SSSSTLNLYPIQRSHSSKSYGGSYANGLWISPVLNLPTPCISKGSGTSLFGLGSFLRVGK 231
Query: 234 VKRNKK 239
K++ K
Sbjct: 232 AKKSNK 237
>Glyma20g25130.1
Length = 259
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 113/269 (42%), Gaps = 46/269 (17%)
Query: 3 MCSETSP----PRLSFSHDLSELQVLPL-IQDVHF-RDTLLLDSNPXXXXXXXXXXXXXX 56
+CSE S PR+SFSHDL + + ++D H D LLDS+
Sbjct: 5 VCSEISSTGISPRISFSHDLKNTEDASVRVEDPHRGSDLCLLDSSSDFVFCITNGLAQQL 64
Query: 57 XXADELFSNGVILPTQIQDNKTTTPKHSHHVEXXXXXXXXXXXXXVDKVKKETIRELM-- 114
ADELFSNG I+PT+I+ + P S +K++K+ ++E +
Sbjct: 65 SSADELFSNGKIIPTEIK-RVSNEPSQSQ-------------LATTEKIQKKRLKEFLSA 110
Query: 115 -IDVSANGERKKSS--FWGFSRSKSLNCDDTK-KIMVCPLPLLSRSNSMGSVAXXXXXXX 170
D + N E K SS FW F RS SLN D T+ ++ L LSRSNS GS
Sbjct: 111 SSDEAENEEEKPSSKYFWQFKRSSSLNFDTTRGNGLIRSLQFLSRSNSTGSAPNPKQTEL 170
Query: 171 XXXXXXXXXXXXXXXXXXXXG--------------------KTYGGSFGNGHWVSPVLNV 210
K GGS GNG +SPVLN+
Sbjct: 171 PRETHKQRLQKQSSVSSRRSSSSSSSSSTYYFYSSSQKPSLKKNGGSSGNGVRISPVLNL 230
Query: 211 PTPCVSKGSSNLFGLGSFLRVGKVKRNKK 239
P + K ++ FG GS GK KRNKK
Sbjct: 231 PQAYIPKATARFFGFGSLFCNGKSKRNKK 259
>Glyma10g41910.1
Length = 262
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/269 (31%), Positives = 110/269 (40%), Gaps = 43/269 (15%)
Query: 3 MCSETSP----PRLSFSHDLSELQVLPL-IQDVHF-RDTLLLDSNPXXXXXXXXXXXXXX 56
+CSE S PR+SFSHDL + + ++D H D LLDS+
Sbjct: 5 VCSEISSTGISPRISFSHDLKNTEDASVRVEDRHRGSDLCLLDSSSDFVFCITNGLAQQL 64
Query: 57 XXADELFSNGVILPTQIQDNKTTTPKHSHHVEXXXXXXXXXXXXXVDKVKKETIRELM-- 114
ADELFSNG I+PT+I+ V +K++K+ ++E +
Sbjct: 65 SSADELFSNGKIIPTEIK-----------RVSKEPKEPSRPQPATTEKIQKKRLKEFLSA 113
Query: 115 -IDVSANGERKKSS--FWGFSRSKSLNCDDTK-KIMVCPLPLLSRSNSMGSVAXXXXXXX 170
D + N E K SS FW F RS SLN D T+ ++ L LSRSNS GS
Sbjct: 114 SSDEAENEEEKPSSKYFWQFKRSSSLNFDTTRGNGLIRSLQFLSRSNSTGSAPNPKQTEL 173
Query: 171 XXXXXXXXXXXXXXXXXXXXG--------------------KTYGGSFGNGHWVSPVLNV 210
K GGS GNG +SPVLN+
Sbjct: 174 PRETHKQRLQKQSSVSSRRSSSSSSSSSTYYFYSSSQKPSLKKNGGSSGNGVRISPVLNL 233
Query: 211 PTPCVSKGSSNLFGLGSFLRVGKVKRNKK 239
P + K ++ FG GS GK KR KK
Sbjct: 234 PQAYIPKATARFFGFGSLFCNGKSKRKKK 262
>Glyma08g48160.1
Length = 266
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 97/251 (38%), Gaps = 44/251 (17%)
Query: 10 PRLSFSHDLSELQVLPLIQDVHFRDTLLLDSNPXXXXXXXXXXXXXXXXADELFSNGVIL 69
PR+SFSHD S+ V+P+ Q ++ L+ ADELFS+G IL
Sbjct: 22 PRISFSHDFSQSDVIPVEQLPFRSNSSGLNPTIDFDFCVSESFELESSSADELFSHGRIL 81
Query: 70 PTQIQDN------------KTTTPKHSHHVEXXXXXXXXXXXXXVDKVKKETIRELMIDV 117
PT+++ K+T+P + ++ + + + + + +
Sbjct: 82 PTEVKRKNNAVPPMKQLAPKSTSPLPPPYAAPNGVSTSKNLKKEINPKESKCLNDEVYE- 140
Query: 118 SANGERKKSSFWGFSRSKSLNCDDTKKIMVCPLPLLSRSNSMG----SVAXXXXXXXXXX 173
+ KSSFW F RS S C + CPLPLLSRSNS G SV
Sbjct: 141 ---KQSSKSSFWIFKRSSS--CGSGPRRSFCPLPLLSRSNSTGSSTPSVKRSHPLSKEGT 195
Query: 174 XXXXXXXXXXXXXXXXXG---------------KTYGGSFGNGHWVSPVLNVPTPCVSKG 218
G T+ GS+GN V+PVLNVP
Sbjct: 196 VNNNIKQKHSSTRLMPNGYLHHHHHQKPPLNYKSTHHGSYGNSVRVNPVLNVPP------ 249
Query: 219 SSNLFGLGSFL 229
+NLFGL S
Sbjct: 250 -ANLFGLASIF 259
>Glyma13g07750.1
Length = 249
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 97/259 (37%), Gaps = 36/259 (13%)
Query: 3 MCSE------TSPPRLSFSHDLSELQVLPLIQDVHFRDTLLLDSNPXXXXXXXXXXXXXX 56
+CSE T PR+SFSHD S+ V+P+ + ++ L+S+
Sbjct: 5 ICSENCGVSMTMSPRISFSHDFSQSDVIPVEKHPLRSNSSGLNSSMDFDFCVRESLELES 64
Query: 57 XXADELFSNGVILPTQIQDNKTTTPKHSHHVEXXXXXXXXXXXXXVDKVKKETIRELMID 116
ADELFS+G P P+ + K + +EL +
Sbjct: 65 SSADELFSHG---PKSQLAPPPPQPQLPPPSKAICDSASSTTRKSSKKESHKDGKELNDE 121
Query: 117 VSANGERKKSSFWGFSRSKSLNCDDTKKIMVCPLPLLSRSNSMGS--------------- 161
V N ++ SFW F RS S C + +CPLPLLSRSNS GS
Sbjct: 122 V--NEKQSSKSFWRFKRSSS--CGSGYRSSLCPLPLLSRSNSTGSSPSVRRIPLSTEGHH 177
Query: 162 -VAXXXXXXXXXXXXXXXXXXXXXXXXXXXGKTYGGSFGNGHWVSPVLNVPTPCVSKGSS 220
V + GS NG VSPVLNVP S+
Sbjct: 178 HVKQDSQKRLLPAQVSQSHSLASHNHQKPPLQRSHGSHANGVRVSPVLNVP-------SA 230
Query: 221 NLFGLGSFLRVGKVKRNKK 239
NL GLGS + K KK
Sbjct: 231 NLLGLGSIFSNNRDKSKKK 249
>Glyma19g06850.1
Length = 265
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 103/284 (36%), Gaps = 77/284 (27%)
Query: 4 CSETSPPRLSFSHDLSELQVLPLIQDVHFRDTLLLDSNPXXXXXXXXXXXXXXXXADELF 63
C + PR+SFSHD S+ V+P+ + ++ L+S+ ADELF
Sbjct: 10 CGVSMSPRISFSHDFSQSDVIPVEKHPLRSNSSGLNSSIDFDFCVHESLELESSSADELF 69
Query: 64 SNGVILPTQIQ-----------------------------------DNKTTTPKHSHHVE 88
S+GV+LPTQI+ DN ++T + S E
Sbjct: 70 SHGVLLPTQIKNNNINNNAILKPKSQLAPPPPQPQPQLPPPPKAICDNASSTTRKSSKKE 129
Query: 89 XXXXXXXXXXXXXVDKVKKETIRELMIDVSANGERKKSSFWGFSRSKSLNCDDTKKIMVC 148
KV KE E+ + ++ SFW F RS S +C
Sbjct: 130 S-------------HKVGKELNDEV------DEKQSSKSFWRFKRSSSC--GSGYGSSLC 168
Query: 149 PLPLLSRSNSMGSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXG--------------KTY 194
PLPLLSRSNS GS +++
Sbjct: 169 PLPLLSRSNSTGSSPSVKRIPLSKEVKQNSQKRSSSSTRFSQSHHLASHNHQKPPLKRSH 228
Query: 195 GGSFGNGHWVSPVLNVPTPCVSKGSSNLFGLGSFLRVGKVKRNK 238
G NG VSPVLNVP S+NLFGLGS + K K
Sbjct: 229 GSYANNGVRVSPVLNVP-------SANLFGLGSIFSNNRDKSKK 265
>Glyma06g15230.1
Length = 259
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 96/275 (34%), Gaps = 77/275 (28%)
Query: 10 PRLSFSHDLSELQVLPLIQDVHFRDTLLLDSNPXXXXXXX----XXXXXXXXXADELFSN 65
PR+SFSHD ++T+ L+ P ADELFSN
Sbjct: 17 PRISFSHDP--------------KNTVPLEEGPDQDTSSDFVFCITNAQKLSSADELFSN 62
Query: 66 GVILPTQIQD------NKTTTPKHSHHVEXXXXXXXXXXXXXVDKVKKETIRELMIDVSA 119
G ILPTQI N P+H HH + + +K+ ++E + +
Sbjct: 63 GKILPTQINSRLVSIPNSNYAPRH-HHPQ--------------QQQRKKMLKEFLSEPDE 107
Query: 120 NGE-----------RKKSSFWGFSRSKSLNCDDT---KKIMVCPLPLLSRSNSMGSVAXX 165
+ R +S F RS S+NCD K ++ L LSRS S GS
Sbjct: 108 DDIIDIIIEEEEEMRPSNSVKLFWRSSSVNCDGATRGKSMLRSSLQFLSRSYSTGSAPNT 167
Query: 166 XXXXXX--------XXXXXXXXXXXXXXXXXXXGKTY-------------GGSFGNGHWV 204
G Y S NG +
Sbjct: 168 PKHHAVNVIPRHKLAKQSSASSFSLSSSSSTSSGAYYFYDSCQKNPSLKKNFSGNNGVRI 227
Query: 205 SPVLNVPTPCVSKGSSNLFGLGSFLRVGKVKRNKK 239
SP+LN+P K + ++FG GS GK+KR KK
Sbjct: 228 SPILNLPH---HKATRSIFGFGSLFCNGKIKRKKK 259