Miyakogusa Predicted Gene

Lj2g3v0704840.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0704840.1 tr|Q9LJQ6|Q9LJQ6_ARATH AT3G18240 protein
OS=Arabidopsis thaliana GN=AT3g18240/MIE15_3 PE=2
SV=1,37.72,0.0000000000002,seg,NULL,CUFF.35248.1
         (164 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g31180.1                                                       104   3e-23

>Glyma09g31180.1 
          Length = 148

 Score =  104 bits (260), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 60/115 (52%), Positives = 69/115 (60%), Gaps = 13/115 (11%)

Query: 1   MNSNLLRNLAFHTRRLLLSPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAQKKQDPL 60
           MN+NLLRNL+FH RRL  SP                               H   K   L
Sbjct: 1   MNANLLRNLSFHARRLRFSP------------TPSIFSPTATAPTSFSSRSHVPDKPHSL 48

Query: 61  VVEEISNEELKSRVARLQEGDEDAIPSLFEAIMQRYLTDKPIEADPELMKEILGK 115
           + E+ISNEELK RVA+LQEGD +AIPS+FEAI+QRYL  KPIEAD ELM+EILGK
Sbjct: 49  L-EDISNEELKRRVAKLQEGDAEAIPSVFEAILQRYLAGKPIEADEELMREILGK 102