Miyakogusa Predicted Gene

Lj2g3v0677960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0677960.1 Non Chatacterized Hit- tr|A5ATQ8|A5ATQ8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,53.64,0.00000000000007,seg,NULL,TC60059.path2.1
         (95 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g33910.1                                                        80   4e-16
Glyma08g05720.1                                                        75   2e-14
Glyma07g11430.1                                                        61   2e-10

>Glyma05g33910.1 
          Length = 996

 Score = 80.5 bits (197), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 56/96 (58%), Gaps = 3/96 (3%)

Query: 1  MKNFLKKFHIMSSNQSEDARGGSTPXXXXXXXXXXXXXXXXX-XNWLHSVSNRQCXXXXX 59
          MKN LKK HIMS NQSEDA+G ++                    NWLHSVSNRQ      
Sbjct: 1  MKNILKKLHIMS-NQSEDAQGATSSKSNKSSDGSSSSTAPKKLSNWLHSVSNRQSPSPPS 59

Query: 60 XXXARAERVEPSDLVSSAGGLDVASDSVKCDSGSST 95
             AR ER+EPSD VSS GGLDV SDS + DS SST
Sbjct: 60 PILARGERMEPSDSVSS-GGLDVVSDSARRDSESST 94


>Glyma08g05720.1 
          Length = 1031

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/97 (50%), Positives = 55/97 (56%), Gaps = 4/97 (4%)

Query: 1  MKNFLKKFHIMSSNQSEDARGGSTPXXXXXXXXXXX--XXXXXXXNWLHSVSNRQCXXXX 58
          MKN LKK HIMS NQSEDA+G ++                     NWLHSVSNRQ     
Sbjct: 1  MKNILKKLHIMS-NQSEDAQGATSSKSNKSSSDGSSSSTAPKKLSNWLHSVSNRQSPSPP 59

Query: 59 XXXXARAERVEPSDLVSSAGGLDVASDSVKCDSGSST 95
              AR E ++PSD VSS GGLDV SDS + DS SST
Sbjct: 60 SPNLARGEIMDPSDSVSS-GGLDVVSDSARRDSESST 95


>Glyma07g11430.1 
          Length = 1008

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/106 (42%), Positives = 53/106 (50%), Gaps = 14/106 (13%)

Query: 1   MKNFLKKFHIMSSNQSEDARGG-----------STPXXXXXXXXXXXXXXXXXXNWLHSV 49
           MKN LKK HIMS N+SE+ +G            S+                   +WLHSV
Sbjct: 6   MKNLLKKLHIMS-NRSENEQGSCSSKGNKSNLGSSSSSNKKVLGSKSPQSSGLSSWLHSV 64

Query: 50  SNRQ-CXXXXXXXXARAERVEPSDLVSSAGGLDVASDSVKCDSGSS 94
           +NRQ          AR ER+EPSD VSS GG D  SDS + DSGSS
Sbjct: 65  ANRQSAGPPPSLTQARGERMEPSDAVSS-GGFDAVSDSARLDSGSS 109