Miyakogusa Predicted Gene

Lj2g3v0677940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0677940.1 Non Chatacterized Hit- tr|I3S416|I3S416_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.06,0.0000000005, ,NODE_97508_length_331_cov_10.746223.path1.1
         (34 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g33940.1                                                        60   5e-10
Glyma05g33940.3                                                        60   5e-10
Glyma05g33940.2                                                        60   6e-10
Glyma08g05750.1                                                        56   8e-09

>Glyma05g33940.1 
          Length = 306

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 27/34 (79%), Positives = 31/34 (91%)

Query: 1  MGTVIDSHFLGLTAIVTIGYQFLFFIITALLKFD 34
          MGT+IDSHFL  TA+VTI YQFLFF++TALLKFD
Sbjct: 1  MGTIIDSHFLAFTALVTIAYQFLFFVVTALLKFD 34


>Glyma05g33940.3 
          Length = 291

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 27/34 (79%), Positives = 31/34 (91%)

Query: 1  MGTVIDSHFLGLTAIVTIGYQFLFFIITALLKFD 34
          MGT+IDSHFL  TA+VTI YQFLFF++TALLKFD
Sbjct: 1  MGTIIDSHFLAFTALVTIAYQFLFFVVTALLKFD 34


>Glyma05g33940.2 
          Length = 286

 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/34 (79%), Positives = 31/34 (91%)

Query: 1  MGTVIDSHFLGLTAIVTIGYQFLFFIITALLKFD 34
          MGT+IDSHFL  TA+VTI YQFLFF++TALLKFD
Sbjct: 1  MGTIIDSHFLAFTALVTIAYQFLFFVVTALLKFD 34


>Glyma08g05750.1 
          Length = 291

 Score = 56.2 bits (134), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/34 (79%), Positives = 31/34 (91%)

Query: 1  MGTVIDSHFLGLTAIVTIGYQFLFFIITALLKFD 34
          MGTVI+SHFL  TA+VTI YQFLFF++TALLKFD
Sbjct: 1  MGTVIESHFLAFTALVTIAYQFLFFVVTALLKFD 34