Miyakogusa Predicted Gene

Lj2g3v0676900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0676900.1 tr|B9IEB1|B9IEB1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1101000 PE=4
SV=1,42.95,5e-17,seg,NULL; coiled-coil,NULL;
GOLGIN-84,NULL,gene.g39758.t1.1
         (495 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g33960.1                                                       254   1e-67
Glyma08g05790.1                                                       243   4e-64

>Glyma05g33960.1 
          Length = 645

 Score =  254 bits (650), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 133/150 (88%), Positives = 139/150 (92%)

Query: 343 MVAKLEGEKQSLEKILEERAYQQAQEASQLQNTTMETMEAVELEKQKHNNTRMEVLARLA 402
           +VAKLEGEK+SLEKILEERA QQAQEASQLQ+TTMETMEAVELEKQKHNNTRMEVLARLA
Sbjct: 314 IVAKLEGEKESLEKILEERAKQQAQEASQLQSTTMETMEAVELEKQKHNNTRMEVLARLA 373

Query: 403 KLETVNADLARSLAAVQCNLEVEVKQVAELRQKIVSKEFVHEELRRSMRNPRQTGASRNL 462
           KLET NADLARSLAAVQ NLEVEVKQVAELRQ+I SKE  HEELRR M NPRQTGAS+N 
Sbjct: 374 KLETANADLARSLAAVQWNLEVEVKQVAELRQQITSKELFHEELRRRMTNPRQTGASQNQ 433

Query: 463 LASKGVEFEREILEAELSLINDKVSQLQEK 492
           LASKGVE EREILEAE SLINDKV+QLQEK
Sbjct: 434 LASKGVELEREILEAEHSLINDKVAQLQEK 463



 Score =  189 bits (481), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/262 (51%), Positives = 154/262 (58%), Gaps = 48/262 (18%)

Query: 47  IDQQAAESLRKNEKLRSDELGIHDAPAAKSGSVVSLKNQLKKKPSENNDYHGKLHSDPNF 106
           IDQQAAESLRKNE  RS+E  I DAPA KSGS VSLK+QLKKKP E+N+Y GKL SD NF
Sbjct: 23  IDQQAAESLRKNEGFRSEEPSI-DAPA-KSGSGVSLKDQLKKKPLESNEYRGKLRSDLNF 80

Query: 107 ------TTAPKSSPT--PTLADADWTQLLS--SPTHSIASASGGDHGNG---ARGFNKN- 152
                  +APK SP   PTL D DWT+LLS  +PT S+ASASGG+HGNG    RG ++N 
Sbjct: 81  NGLKATASAPKLSPKSGPTLTDDDWTELLSAPTPTQSVASASGGNHGNGLPAPRGLSRNS 140

Query: 153 GRKHKDLL-LSDVKRNHKTGTSGSRSLQRLNSVKLTRKTSDDGMGFTSERHSTDGKPLVE 211
            RK K +  +SD                 +  VKL+ K  DDG   TS   ST    +VE
Sbjct: 141 SRKQKGIQEMSD----------------SVKEVKLSGKACDDGKESTS-LTSTGRNSVVE 183

Query: 212 KNDKANQQHQHTFNYRDISPPESLQEDNKTLP---MPVSDLD---NAKIAPDVVPGQLRG 265
                N   QH FNYRDISPPE LQED KTL    +P   +D    AKI  DV   QLR 
Sbjct: 184 SKIDEN---QHRFNYRDISPPELLQEDGKTLAAETLPAWGVDEDQEAKIVEDVDGNQLRS 240

Query: 266 AMKARHGLNSLSGNSKSDDFKR 287
            +  RH LNS+     SDD KR
Sbjct: 241 VVLGRHELNSI-----SDDLKR 257


>Glyma08g05790.1 
          Length = 613

 Score =  243 bits (620), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 127/151 (84%), Positives = 137/151 (90%)

Query: 343 MVAKLEGEKQSLEKILEERAYQQAQEASQLQNTTMETMEAVELEKQKHNNTRMEVLARLA 402
           +VAKLEGEK+SLEKILEERA QQAQEASQLQ+T METMEAVELEKQKHNNTRMEVLARLA
Sbjct: 282 IVAKLEGEKESLEKILEERAKQQAQEASQLQSTMMETMEAVELEKQKHNNTRMEVLARLA 341

Query: 403 KLETVNADLARSLAAVQCNLEVEVKQVAELRQKIVSKEFVHEELRRSMRNPRQTGASRNL 462
           KLETVNADLARSLAAVQ +LEVEVKQV+ELRQ+I SKE  HEELRR M+NPRQTGAS+N 
Sbjct: 342 KLETVNADLARSLAAVQWSLEVEVKQVSELRQQISSKELFHEELRRRMKNPRQTGASQNQ 401

Query: 463 LASKGVEFEREILEAELSLINDKVSQLQEKV 493
           L SK VE EREI EAE SLIN+KV+QLQEK 
Sbjct: 402 LVSKSVELEREIHEAEHSLINNKVAQLQEKA 432



 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/175 (61%), Positives = 121/175 (69%), Gaps = 23/175 (13%)

Query: 46  QIDQQAAESLRKNEKLRSDELGIHDAPAAKSGSVVSLKNQLKKKPSENNDYHGKLHSDPN 105
           QIDQQAAESLRKNE  R +E  I DAP  KSGS VSLK+QLKKKP E+N+Y GKL SDPN
Sbjct: 18  QIDQQAAESLRKNEDFRLEEPSI-DAPF-KSGSGVSLKDQLKKKPLESNEYRGKLRSDPN 75

Query: 106 F------TTAPKSSPT--PTLADADWTQLLS--SPTHSIASASGGDHGNG---ARGFNK- 151
           F       +APK SP   PTL D DWT+LLS  SPT SIASASGG+HGNG    RG  + 
Sbjct: 76  FDGLKATASAPKLSPKSGPTLTDDDWTELLSAPSPTQSIASASGGNHGNGLPAPRGLGRS 135

Query: 152 NGRKHKDL----LLSDVKRNHKTGTSGSRSLQRLNS---VKLTRKTSDDGMGFTS 199
           + RK K L    L +DVKRN +TG SG RSLQ+ +S   VKL+RK SDDG   TS
Sbjct: 136 SSRKQKGLSSGSLATDVKRNPRTGNSGLRSLQKSDSVKEVKLSRKASDDGKESTS 190