Miyakogusa Predicted Gene

Lj2g3v0635810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0635810.1 tr|D7KJP0|D7KJP0_ARALL Agenet domain-containing
protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALY,28.52,7e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Agenet,Agenet-like domain; Tudor-like domain
presen,NODE_19654_length_1145_cov_273.335358.path1.1
         (278 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g22810.1                                                       127   1e-29
Glyma16g29630.1                                                        75   8e-14
Glyma16g26120.1                                                        61   1e-09
Glyma09g24640.1                                                        52   1e-06
Glyma09g03740.1                                                        50   3e-06
Glyma05g08290.2                                                        49   6e-06
Glyma05g08290.1                                                        49   6e-06

>Glyma20g22810.1 
          Length = 323

 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 133/283 (46%), Gaps = 49/283 (17%)

Query: 1   MVEYTYC---EQGTNPRVEFVSIDNLRPRPPLKPHHDFKSGDKVDTYNDKGSWLEGHITS 57
           +VEY      ++ T    E + + +LRP PP +   +FK GD+VD +++ G W EGHIT 
Sbjct: 56  LVEYDNLLADDKTTKKLREVLGLRHLRPLPPTETDREFKFGDEVDAFHNDG-WWEGHITQ 114

Query: 58  TLSDGRSFVCYNDPNQKFLFPNEKLRAHHEWIDDHWGPPTQ-----------------QP 100
            L + R  V +    ++ +F  E+LR H EW++  W PP Q                  P
Sbjct: 115 ELENERFAVYFRVSKEQLVFSKEQLRLHREWLNHDWVPPLQQKQQRQQGNGESKKVLLTP 174

Query: 101 KKAEQELFRK-----GDWVEVSSDVDGYLETWFLAEVVEVRVQGKFKYLVRYKHLLDDNS 155
                E  +      G  VEVSSD DG+   WF A VVE    GK K+LV Y  LL D+ 
Sbjct: 175 NVKSVETVKGKGIGVGAIVEVSSDEDGFSGAWFAATVVE--ALGKDKFLVEYHDLLADDD 232

Query: 156 PKYLEEEIDAQHIRPLAPNTRDGDAKLGLVGKVDTWHIGDCDAKYKLGDRVDAWSLSGWR 215
            + L EEIDA HIRP   +T                   D D ++ + D VDA+   GW 
Sbjct: 233 SQ-LREEIDALHIRPHPLDT-------------------DVDGQFSILDEVDAFYNDGWW 272

Query: 216 YAKIIEVQNDNIYKVFLKGDEQEKDNFDPITLRRHYDWVDRKW 258
              I +   D+ Y V+ +   +E + F+   LR H DW+  KW
Sbjct: 273 VGVISKALADSRYVVYFRSSNEELE-FENSQLRLHQDWIGGKW 314



 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 24/153 (15%)

Query: 107 LFRKGDWVEVSSDVDGYLETWFLAEVVEVRVQGKFKYLVRYKHLL-DDNSPKYLEEEIDA 165
            F+ G  VEVSS+ DG+  +WF   V+  R     ++LV Y +LL DD + K L E +  
Sbjct: 21  FFKPGTAVEVSSEDDGFRGSWFTGTVI--RRLASERFLVEYDNLLADDKTTKKLREVLGL 78

Query: 166 QHIRPLAPNTRDGDAKLGLVGKVDTWHIGDCDAKYKLGDRVDAWSLSGWRYAKIIEVQND 225
           +H+RPL P                     + D ++K GD VDA+   GW    I +   +
Sbjct: 79  RHLRPLPPT--------------------ETDREFKFGDEVDAFHNDGWWEGHITQELEN 118

Query: 226 NIYKVFLKGDEQEKDNFDPITLRRHYDWVDRKW 258
             + V+ +   +E+  F    LR H +W++  W
Sbjct: 119 ERFAVYFRV-SKEQLVFSKEQLRLHREWLNHDW 150



 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 20  IDNLRPRP-PLKPHHD--FKSGDKVDTYNDKGSWLEGHITSTLSDGRSFVCYNDPNQKFL 76
           ID L  RP PL    D  F   D+VD + + G W+ G I+  L+D R  V +   N++  
Sbjct: 239 IDALHIRPHPLDTDVDGQFSILDEVDAFYNDGWWV-GVISKALADSRYVVYFRSSNEELE 297

Query: 77  FPNEKLRAHHEWIDDHWGPPTQQPK 101
           F N +LR H +WI   W  P +  K
Sbjct: 298 FENSQLRLHQDWIGGKWVMPCKALK 322


>Glyma16g29630.1 
          Length = 499

 Score = 75.1 bits (183), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 2/79 (2%)

Query: 15  VEFVSIDNLRPRPPLKPHHDFKSGDKVDTYNDKGSWLEGHITSTLSDGRSFVCYNDPNQK 74
           +  VS+ +LRP PP   H +FKSGDKV+ ++D   W EGHIT  L +GR FV     +++
Sbjct: 48  IAVVSLHHLRPLPPPNSHQEFKSGDKVEVFHDH-CWREGHITGDLVNGR-FVVSFRYSKE 105

Query: 75  FLFPNEKLRAHHEWIDDHW 93
             FP E+LR H +WI+D+W
Sbjct: 106 MTFPKEQLREHRQWINDNW 124


>Glyma16g26120.1 
          Length = 103

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 1/86 (1%)

Query: 16  EFVSIDNLRPRPPLKPHHDFKSGDKVDTYNDKGSWLEGHITSTLSDGRSFVCYNDPNQKF 75
           E V++  LR  PP + H +FK  DKV  +++   W EGHIT  L +GR  V +    +  
Sbjct: 19  EVVNLHQLRTLPPPEKHQEFKFRDKVGAFHNDSLW-EGHITQKLGNGRFCVYFPVSEENM 77

Query: 76  LFPNEKLRAHHEWIDDHWGPPTQQPK 101
           +F   KLR H++WI+ +W  P    K
Sbjct: 78  VFSKNKLRTHYKWINHNWVLPITNHK 103


>Glyma09g24640.1 
          Length = 59

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 2/60 (3%)

Query: 31 PHHDFKSGDKVDTYNDKGSWLEGHITSTLSDGRSFVCYNDPNQKFLFPNEKLRAHHEWID 90
           HH+F SGD V+ +  K  W EG +T TL +GR  V +ND  ++  F  E LRA  +WI+
Sbjct: 1  SHHEFNSGDNVEAFR-KDRWWEGRVTETLGNGRFIVSFNDS-EEITFSKELLRAPLQWIN 58


>Glyma09g03740.1 
          Length = 263

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 101 KKAEQELFRKGDWVEVSSDVDGYLETWFLAEVVEVRVQGKFKYLVRYKHLLDDNSPKYLE 160
           ++ ++  F+KG   EVS D  GY   WFL  VV++   GK ++ V Y+ L  +   + L+
Sbjct: 11  RQLKESKFKKGIVEEVSRDDKGYKGVWFLDTVVDI--IGKDRFQVEYRDLKTNGGTQLLK 68

Query: 161 EEIDAQHIRPLAPNT 175
           EEIDA+ IRP  P  
Sbjct: 69  EEIDARLIRPCPPEV 83


>Glyma05g08290.2 
          Length = 397

 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 28/173 (16%)

Query: 108 FRKGDWVEVSSDVDGYLETWFLAEVVEVRVQGKFKYLVRYKHLLDDNSPKYLEEEIDAQH 167
           F+KG+ VEV S V+    +W  AE++         Y V+Y     D + + + E++  + 
Sbjct: 3   FKKGNKVEVLSKVEVPCGSWLYAEII---CGNGHHYTVKYDGYESD-AGEAIVEQVSRKD 58

Query: 168 IRPLAPNTRDGDAKLGLVGKVDTWHIGDCDAKYKLGDRVDAWSLSGWRYAKIIEVQNDNI 227
           IRP  P           +   D W+ GD          V+ +    W+ A +++V   N 
Sbjct: 59  IRPCPP----------ALELTDNWNSGDV---------VEVFQNFSWKMATVLKVFGKNH 99

Query: 228 YKVFLKGD--EQEKDNFDPITLRRHYDWVDRKWEIASQGSSCSSDEEYGFAQI 278
             V L G   E +   FD   +R    W D KW I  +GSS   + +   AQ+
Sbjct: 100 ILVRLLGSSLEFQVSKFD---IRVRQSWQDDKWIIVGKGSSSHENRKRSSAQL 149


>Glyma05g08290.1 
          Length = 397

 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 28/173 (16%)

Query: 108 FRKGDWVEVSSDVDGYLETWFLAEVVEVRVQGKFKYLVRYKHLLDDNSPKYLEEEIDAQH 167
           F+KG+ VEV S V+    +W  AE++         Y V+Y     D + + + E++  + 
Sbjct: 3   FKKGNKVEVLSKVEVPCGSWLYAEII---CGNGHHYTVKYDGYESD-AGEAIVEQVSRKD 58

Query: 168 IRPLAPNTRDGDAKLGLVGKVDTWHIGDCDAKYKLGDRVDAWSLSGWRYAKIIEVQNDNI 227
           IRP  P           +   D W+ GD          V+ +    W+ A +++V   N 
Sbjct: 59  IRPCPP----------ALELTDNWNSGDV---------VEVFQNFSWKMATVLKVFGKNH 99

Query: 228 YKVFLKGD--EQEKDNFDPITLRRHYDWVDRKWEIASQGSSCSSDEEYGFAQI 278
             V L G   E +   FD   +R    W D KW I  +GSS   + +   AQ+
Sbjct: 100 ILVRLLGSSLEFQVSKFD---IRVRQSWQDDKWIIVGKGSSSHENRKRSSAQL 149