Miyakogusa Predicted Gene

Lj2g3v0635710.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0635710.1 Non Chatacterized Hit- tr|B9RFL4|B9RFL4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,32.89,0.00000000000003,Agenet,Agenet-like domain; Tudor-like domain
present in plant sequences,Tudor-like, plant,CUFF.35056.1
         (191 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g22810.1                                                        80   2e-15
Glyma10g28670.1                                                        57   2e-08
Glyma09g03740.1                                                        54   7e-08

>Glyma20g22810.1 
          Length = 323

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 75/141 (53%), Gaps = 15/141 (10%)

Query: 45  IGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRLHDVTGKLLKEKIDDDHIRPL 104
           +G +VEVSS   G+ G WF A VVE   + KFLVE+   L D   + L+E+ID  HIRP 
Sbjct: 189 VGAIVEVSSDEDGFSGAWFAATVVEALGKDKFLVEYHDLLADDDSQ-LREEIDALHIRPH 247

Query: 105 PPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVAMIRKVHGNNTYDVWLEGDPQ 164
           P   L+T          D + ++ +LD VDA Y +GW V +I K   ++ Y V+     +
Sbjct: 248 P---LDT----------DVDGQFSILDEVDAFYNDGWWVGVISKALADSRYVVYFRSSNE 294

Query: 165 PLDGLTPSQLRRHYDRAGCDW 185
            L+    SQLR H D  G  W
Sbjct: 295 ELE-FENSQLRLHQDWIGGKW 314



 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 16/145 (11%)

Query: 42  LFRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRL-HDVTGKLLKEKIDDDH 100
            F+ G  VEVSS+  G+RG+WF   V+      +FLVE+ + L  D T K L+E +   H
Sbjct: 21  FFKPGTAVEVSSEDDGFRGSWFTGTVIRRLASERFLVEYDNLLADDKTTKKLREVLGLRH 80

Query: 101 IRPLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVAMIRKVHGNNTYDVWLE 160
           +RPLPP    T R+F            K  D VDA + +GW    I +   N  + V+  
Sbjct: 81  LRPLPPT--ETDREF------------KFGDEVDAFHNDGWWEGHITQELENERFAVYFR 126

Query: 161 GDPQPLDGLTPSQLRRHYDRAGCDW 185
              + L   +  QLR H +    DW
Sbjct: 127 VSKEQL-VFSKEQLRLHREWLNHDW 150


>Glyma10g28670.1 
          Length = 107

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 62/141 (43%), Gaps = 43/141 (30%)

Query: 45  IGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRLHDVTGKLLKEKIDDDHIRPL 104
           +G +VEVSS      G WF A VV++  + KFLVE+             E+ID  HIRP 
Sbjct: 6   VGAIVEVSSD----SGAWFAATVVKVVRKDKFLVEYH------------EEIDVLHIRPH 49

Query: 105 PPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVAMIRKVHGNNTYDVWLEGDPQ 164
           PP+A             D + ++ LLD +DA Y +GW V   R  +    ++        
Sbjct: 50  PPDA-------------DVDGQFSLLDELDAFYNDGWWVVYFRSSNEELEFE-------- 88

Query: 165 PLDGLTPSQLRRHYDRAGCDW 185
                  SQLR H D  G  W
Sbjct: 89  ------HSQLRLHQDWIGGKW 103


>Glyma09g03740.1 
          Length = 263

 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 5/81 (6%)

Query: 43  FRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRLHDVTGKLLKEKIDDDHIR 102
           F+ G + EVS   KGY+G WFL  VV++  + +F VE++    +   +LLKE+ID   IR
Sbjct: 18  FKKGIVEEVSRDDKGYKGVWFLDTVVDIIGKDRFQVEYRDLKTNGGTQLLKEEIDARLIR 77

Query: 103 PLPPNA-----LNTHRDFDAW 118
           P PP           ++ DAW
Sbjct: 78  PCPPEVSFAGPFKQFQEVDAW 98