Miyakogusa Predicted Gene

Lj2g3v0633870.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0633870.2 Non Chatacterized Hit- tr|G7JP36|G7JP36_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,82.12,0,NRDE-2,siRNA-mediated silencing protein NRDE-2; HAT
(Half-A-TPR) repeats,RNA-processing protein, HAT,CUFF.34985.2
         (591 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g34520.1                                                       968   0.0  
Glyma09g29980.1                                                       957   0.0  

>Glyma16g34520.1 
          Length = 1178

 Score =  968 bits (2503), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/592 (79%), Positives = 527/592 (89%), Gaps = 1/592 (0%)

Query: 1    MEDNQDEDEGKDVEPEVDTENLLNLLGIDVNSGDGGEVTEASTWIKWSAEESSRDCDQWM 60
            MED QDE+E  +VEPEVDTE+LL +LGID+N GDGGEV +  TWIKWS EESSRDCDQWM
Sbjct: 587  MEDIQDEEEYTEVEPEVDTEDLLKMLGIDMNDGDGGEVNDTLTWIKWSKEESSRDCDQWM 646

Query: 61   PVRXXXXXXX-XXXXXXXXXXXQLLRIILYEDVTEYLFTLSTEEARLSLVSQFIDFYGGK 119
            PVR                   QLLR++LYEDV EYLF+LST EARLSL+SQFIDFYGGK
Sbjct: 647  PVRGKSGTTSPANEADKTDEDEQLLRVVLYEDVNEYLFSLSTTEARLSLLSQFIDFYGGK 706

Query: 120  MSHLFCSNSPSWTENVLSMEDLPDSMLEKLKCIHEVLTKTKNSPAGFNFEFPSGSLSSNA 179
            MS LFCSNSP+  +N+LS+EDLPDSMLEKLKCIHEVLTK +NS AGF+FEF SGSLS NA
Sbjct: 707  MSQLFCSNSPTRADNILSLEDLPDSMLEKLKCIHEVLTKQQNSLAGFSFEFLSGSLSRNA 766

Query: 180  DIMKFVRNAVLLCLTVFPRNHILEEAVLISEELYVTKMNSSNCMATPCRALAKSLLKSDR 239
            DIMKF+RNAVLLCLTVFPRN++LEEAVLISEELYVTKMNSSN M TPCR+LAKSLLKSDR
Sbjct: 767  DIMKFIRNAVLLCLTVFPRNYMLEEAVLISEELYVTKMNSSNGMITPCRSLAKSLLKSDR 826

Query: 240  QDVLLCGVYAQREANYGNIDLARKVFDMALLSVEGLPVELQSSAPLLYFWYAEMELENNS 299
            QD+LLCGVYA+REA YGNID ARKVFDMALLSVE LPVELQS+APLLYFWYAE+EL NNS
Sbjct: 827  QDLLLCGVYARREATYGNIDHARKVFDMALLSVEALPVELQSNAPLLYFWYAEVELANNS 886

Query: 300  GGDREPSYRAIHVLSCLGNGTKYNPFKSQASSLQVLRAHQGFKERLRTVRSSWVRGMIND 359
              DRE S R IH+LSCLG+GTKYNPFKSQASSL +LRAHQGFKE+LRTV SSWVRG+IND
Sbjct: 887  ANDRESSSRGIHILSCLGSGTKYNPFKSQASSLLLLRAHQGFKEKLRTVWSSWVRGIIND 946

Query: 360  HSVALVCSAALFEELTTGWEAGIEVLDQAFAAVLPERRSISYQLEFLFNYYIRILRRHQR 419
             SVAL+CSAALFEELTTGW+AGIEVL+QAF+ VLPERRS  YQLEFLFNYYI++L+RHQR
Sbjct: 947  QSVALICSAALFEELTTGWDAGIEVLNQAFSMVLPERRSQGYQLEFLFNYYIKMLQRHQR 1006

Query: 420  QSSLLKVWESISQGLQIYPFSPELLKGVVEVGHFHTTSNRLRRILDDCCYKKPSVLVWLF 479
            QSSL+KVWESI  GLQIYPFSPELLK VVEVGH++TTSN+LRRILDDC YKKPSV++WLF
Sbjct: 1007 QSSLMKVWESILHGLQIYPFSPELLKDVVEVGHYYTTSNKLRRILDDCSYKKPSVVLWLF 1066

Query: 480  TLSYEMSRGGSHHRIRGLFERALGNDRLCSSVVLWRCYLVYELNIAHDPSSARRVFFRAI 539
             LSYE+ +GGSHHRIRGLFE+AL ND+LCSSV+LWRCY+++E+ IAHDPS+ARR FFRAI
Sbjct: 1067 ALSYEIFKGGSHHRIRGLFEKALANDKLCSSVLLWRCYIMFEMEIAHDPSAARRAFFRAI 1126

Query: 540  HACPWSKRLWLDGFHQLNSVLTGKELSDLQEVMRDKELNLRTDIYEILLQES 591
            H+CPWSKRLWLDGF +LNSVLT KELSDLQEVMRDKELNLRTDIYEILLQ+S
Sbjct: 1127 HSCPWSKRLWLDGFLKLNSVLTAKELSDLQEVMRDKELNLRTDIYEILLQQS 1178


>Glyma09g29980.1 
          Length = 1156

 Score =  957 bits (2474), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/591 (79%), Positives = 524/591 (88%), Gaps = 13/591 (2%)

Query: 1    MEDNQDEDEGKDVEPEVDTENLLNLLGIDVNSGDGGEVTEASTWIKWSAEESSRDCDQWM 60
            MED QDE+E K+VEPEVDTENLL +LGID+N GDG EV + STWIKWS EES RDCDQWM
Sbjct: 579  MEDIQDEEEYKEVEPEVDTENLLKMLGIDMNDGDGSEVNDTSTWIKWSKEESFRDCDQWM 638

Query: 61   PVRXXXXXXXXXXXXXXXXXXQLLRIILYEDVTEYLFTLSTEEARLSLVSQFIDFYGGKM 120
            PVR                  QLLR++LYEDV EYLF+LST EARLSL+SQFIDFYGGKM
Sbjct: 639  PVRRKSDEDE-----------QLLRVVLYEDVNEYLFSLSTTEARLSLLSQFIDFYGGKM 687

Query: 121  SHLFCSNSPSWTENVLSMEDLPDSMLEKLKCIHEVLTKTKNSPAGFNFEFPSGSLSSNAD 180
            S LFCSNSP+W +N+LS+EDLPDSMLEKLKCIHEVLTKT+NSP G++FE+ SGS S NAD
Sbjct: 688  SQLFCSNSPTWADNILSLEDLPDSMLEKLKCIHEVLTKTQNSPTGYSFEYLSGSFSRNAD 747

Query: 181  IMKFVRNAVLLCLTVFPRNHILEEAVLISEELYVTKMNSSNCMATPCRALAKSLLKSDRQ 240
             MKF++NAVLLCLTVFPRN++LEEAVLISEELYVTKMNSS  M TPCR+LAKSLLKSDRQ
Sbjct: 748  FMKFIQNAVLLCLTVFPRNYMLEEAVLISEELYVTKMNSSG-MVTPCRSLAKSLLKSDRQ 806

Query: 241  DVLLCGVYAQREANYGNIDLARKVFDMALLSVEGLPVELQSSAPLLYFWYAEMELENNSG 300
            DVLLCGVYA+REA YGNID ARKVFDMALLSVE LPVELQSSAPLLYFWYAE+EL + + 
Sbjct: 807  DVLLCGVYARREATYGNIDHARKVFDMALLSVEALPVELQSSAPLLYFWYAEVELAS-TA 865

Query: 301  GDREPSYRAIHVLSCLGNGTKYNPFKSQASSLQVLRAHQGFKERLRTVRSSWVRGMINDH 360
             DRE S RAIH+LSCLG+GTKYNPFKSQASSL +LRAHQGFKE+LRTV SSWVRG+IND 
Sbjct: 866  NDRESSSRAIHILSCLGSGTKYNPFKSQASSLLLLRAHQGFKEKLRTVWSSWVRGIINDQ 925

Query: 361  SVALVCSAALFEELTTGWEAGIEVLDQAFAAVLPERRSISYQLEFLFNYYIRILRRHQRQ 420
            SVAL+CSAALFEELTTGW+ GIEVL+QAF+ VLPERRS  YQLEFLFNYYI++L+RHQRQ
Sbjct: 926  SVALICSAALFEELTTGWDVGIEVLNQAFSMVLPERRSQGYQLEFLFNYYIKMLQRHQRQ 985

Query: 421  SSLLKVWESISQGLQIYPFSPELLKGVVEVGHFHTTSNRLRRILDDCCYKKPSVLVWLFT 480
            SSL+KVWESI  GLQIYPFSPELLK VVEVGH++TTSN+LR ILDDCCYKKPSV++WLF 
Sbjct: 986  SSLMKVWESILHGLQIYPFSPELLKDVVEVGHYYTTSNKLRWILDDCCYKKPSVVLWLFA 1045

Query: 481  LSYEMSRGGSHHRIRGLFERALGNDRLCSSVVLWRCYLVYELNIAHDPSSARRVFFRAIH 540
            LSYEM +GGSHHRIRGLFE+AL ND LCSSV+LWRCY+++E+ IAHDPS+ARR FFRAIH
Sbjct: 1046 LSYEMFKGGSHHRIRGLFEKALSNDGLCSSVLLWRCYIMFEMEIAHDPSAARRAFFRAIH 1105

Query: 541  ACPWSKRLWLDGFHQLNSVLTGKELSDLQEVMRDKELNLRTDIYEILLQES 591
            +CPWSKRLWLDGF +LNSVLT KELSDLQEVMRDKELNLRTDIYEILLQES
Sbjct: 1106 SCPWSKRLWLDGFLKLNSVLTAKELSDLQEVMRDKELNLRTDIYEILLQES 1156