Miyakogusa Predicted Gene

Lj2g3v0632440.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0632440.1 tr|C1FGI8|C1FGI8_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPUN_101999,47.5,1e-16,DNA_pol_E_B,DNA polymerase alpha/epsilon,
subunit B; seg,NULL; SUBFAMILY NOT NAMED,NULL; DNA
POLYMER,CUFF.34942.1
         (525 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g34470.2                                                       853   0.0  
Glyma16g34470.1                                                       776   0.0  
Glyma09g29920.1                                                       276   4e-74

>Glyma16g34470.2 
          Length = 534

 Score =  853 bits (2204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/534 (77%), Positives = 454/534 (85%), Gaps = 16/534 (2%)

Query: 1   MNASTRKKVQKKCKIRGYNLKLEALDEILSYVSRFEGXXXXXXXXXXXXXXEHESLNSTI 60
           MNAS RKKVQ+KCKIRGYNLK++AL+EILS+ SRFEG              +  SL STI
Sbjct: 1   MNASMRKKVQRKCKIRGYNLKVDALNEILSFASRFEGPDEDEAIDLLLVELD-SSLKSTI 59

Query: 61  IDKEPVHRVVTLLLKXXXXXXXXXXXXXXXXXXXXLRVVDAFLVSKFKYDAIRKQFYEHP 120
           IDKE V RVV+LLL+                    +RVVDAFL+ K+KYD  RKQFYEH 
Sbjct: 60  IDKETVQRVVSLLLEATEATEETSDAAAA------IRVVDAFLIPKYKYDYSRKQFYEHT 113

Query: 121 GSLPIHGDASAKAALYRDRFLLLFQRLSRDQNFSKPAFDSEFSHFGSCEISPIQSLVGRT 180
           GSL IHG+ASAK+ LYR+RFLLLFQRLSRDQ+FS PAF+SEFSHFGSCEISPIQSLVG+T
Sbjct: 114 GSLSIHGEASAKSDLYRERFLLLFQRLSRDQHFSAPAFESEFSHFGSCEISPIQSLVGQT 173

Query: 181 GRRWVMGVISQLEDGHFYLEDLSASVEINLSNA---------KITTGFFSENTIVVVEGE 231
           GRRWVMGVISQLEDGH+YLEDL+A+V+INL +          +ITTG FSENTIVV EGE
Sbjct: 174 GRRWVMGVISQLEDGHYYLEDLTAAVKINLCSNPSDSRTLQYRITTGLFSENTIVVAEGE 233

Query: 232 MLVEGIFQVLTCGFPPLEDRDKSLKTLAGHDFFGGGTFTKEETIRLVEMEKRAVNDMFVI 291
           MLVEGIFQVLTCGFPPLEDRDKS+  LAGHDFFG GTFTKEETIRL EME++AVNDMF+I
Sbjct: 234 MLVEGIFQVLTCGFPPLEDRDKSVTLLAGHDFFGAGTFTKEETIRLAEMEEKAVNDMFII 293

Query: 292 LSDVWLDNDEALGKLGTVLDGFESVDVVPSLFVFMGNFSSHPCNLSFHSYSTLRLQFGKL 351
           LSD+WLDN+E L KL  VLDGFE   VVPSLFVFMGNFSS PCNLSFH YS+LR+QFGKL
Sbjct: 294 LSDIWLDNEETLKKLEVVLDGFEKEIVVPSLFVFMGNFSSKPCNLSFHFYSSLRMQFGKL 353

Query: 352 GQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYITEELQEHIPNAIFASNPCRI 411
           G+MIAAH RLKEHS+FLFIPGPDDAGPS VLPRCALPKY+TEELQ+HIPNAIF+SNPCR+
Sbjct: 354 GEMIAAHTRLKEHSKFLFIPGPDDAGPSNVLPRCALPKYLTEELQKHIPNAIFSSNPCRV 413

Query: 412 KFYTQEIVFFRQDLLYRMRRSCLMPPSTEETDDPFQHLVATITHQSHLCPLPLTVQPILW 471
           KFYTQEIVFFRQD+LYRMRRSCLMPPSTEET D F+HLVATITHQSHLCPLPLTVQPI+W
Sbjct: 414 KFYTQEIVFFRQDMLYRMRRSCLMPPSTEETCDHFEHLVATITHQSHLCPLPLTVQPIIW 473

Query: 472 NYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFNPGSFSIDSTFVVYRPCSQE 525
           NYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFN GSF+ID+TFV YRPCSQE
Sbjct: 474 NYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFNTGSFAIDNTFVAYRPCSQE 527


>Glyma16g34470.1 
          Length = 570

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/494 (76%), Positives = 416/494 (84%), Gaps = 16/494 (3%)

Query: 1   MNASTRKKVQKKCKIRGYNLKLEALDEILSYVSRFEGXXXXXXXXXXXXXXEHESLNSTI 60
           MNAS RKKVQ+KCKIRGYNLK++AL+EILS+ SRFEG              +  SL STI
Sbjct: 1   MNASMRKKVQRKCKIRGYNLKVDALNEILSFASRFEGPDEDEAIDLLLVELD-SSLKSTI 59

Query: 61  IDKEPVHRVVTLLLKXXXXXXXXXXXXXXXXXXXXLRVVDAFLVSKFKYDAIRKQFYEHP 120
           IDKE V RVV+LLL+                    +RVVDAFL+ K+KYD  RKQFYEH 
Sbjct: 60  IDKETVQRVVSLLLEATEATEETSDAAAA------IRVVDAFLIPKYKYDYSRKQFYEHT 113

Query: 121 GSLPIHGDASAKAALYRDRFLLLFQRLSRDQNFSKPAFDSEFSHFGSCEISPIQSLVGRT 180
           GSL IHG+ASAK+ LYR+RFLLLFQRLSRDQ+FS PAF+SEFSHFGSCEISPIQSLVG+T
Sbjct: 114 GSLSIHGEASAKSDLYRERFLLLFQRLSRDQHFSAPAFESEFSHFGSCEISPIQSLVGQT 173

Query: 181 GRRWVMGVISQLEDGHFYLEDLSASVEINLSNA---------KITTGFFSENTIVVVEGE 231
           GRRWVMGVISQLEDGH+YLEDL+A+V+INL +          +ITTG FSENTIVV EGE
Sbjct: 174 GRRWVMGVISQLEDGHYYLEDLTAAVKINLCSNPSDSRTLQYRITTGLFSENTIVVAEGE 233

Query: 232 MLVEGIFQVLTCGFPPLEDRDKSLKTLAGHDFFGGGTFTKEETIRLVEMEKRAVNDMFVI 291
           MLVEGIFQVLTCGFPPLEDRDKS+  LAGHDFFG GTFTKEETIRL EME++AVNDMF+I
Sbjct: 234 MLVEGIFQVLTCGFPPLEDRDKSVTLLAGHDFFGAGTFTKEETIRLAEMEEKAVNDMFII 293

Query: 292 LSDVWLDNDEALGKLGTVLDGFESVDVVPSLFVFMGNFSSHPCNLSFHSYSTLRLQFGKL 351
           LSD+WLDN+E L KL  VLDGFE   VVPSLFVFMGNFSS PCNLSFH YS+LR+QFGKL
Sbjct: 294 LSDIWLDNEETLKKLEVVLDGFEKEIVVPSLFVFMGNFSSKPCNLSFHFYSSLRMQFGKL 353

Query: 352 GQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYITEELQEHIPNAIFASNPCRI 411
           G+MIAAH RLKEHS+FLFIPGPDDAGPS VLPRCALPKY+TEELQ+HIPNAIF+SNPCR+
Sbjct: 354 GEMIAAHTRLKEHSKFLFIPGPDDAGPSNVLPRCALPKYLTEELQKHIPNAIFSSNPCRV 413

Query: 412 KFYTQEIVFFRQDLLYRMRRSCLMPPSTEETDDPFQHLVATITHQSHLCPLPLTVQPILW 471
           KFYTQEIVFFRQD+LYRMRRSCLMPPSTEET D F+HLVATITHQSHLCPLPLTVQPI+W
Sbjct: 414 KFYTQEIVFFRQDMLYRMRRSCLMPPSTEETCDHFEHLVATITHQSHLCPLPLTVQPIIW 473

Query: 472 NYDHCLYLYPTPHT 485
           NYDHCLYLYPTPHT
Sbjct: 474 NYDHCLYLYPTPHT 487


>Glyma09g29920.1 
          Length = 213

 Score =  276 bits (706), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 150/261 (57%), Positives = 164/261 (62%), Gaps = 69/261 (26%)

Query: 280 MEKRAVNDMFVILSDVWLDNDEALGKLGTVLDGFESVDVVPSLFVFMGNFSSHPCNLSFH 339
           MEK  VNDMFVIL+D+WLDN+EAL KL TVLD FESV+VVPSLFVFMGNFSS PCN SFH
Sbjct: 1   MEKGTVNDMFVILADIWLDNEEALRKLETVLDDFESVEVVPSLFVFMGNFSSKPCNRSFH 60

Query: 340 SYSTLRLQ---------------FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPR 384
           S S+L +                FGKLG+MIA+HPRLKEHS+ L IPGPDDAGPST LPR
Sbjct: 61  SNSSLSITTSSNNIAIKKRYFIIFGKLGEMIASHPRLKEHSKLLIIPGPDDAGPSTALPR 120

Query: 385 CALPKYITEELQEHIPNAIFASNPCRIKFYTQEIVFFRQDLLYRMRRSCLMPPSTEETDD 444
                  T++L +H+                                             
Sbjct: 121 IEE----TDDLFQHL--------------------------------------------- 131

Query: 445 PFQHLVATITHQSHLCPLPLTVQPILWNYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITC 504
                VATITHQSHLCPLPLTVQP +WNYDHCLYLYPTPHTIVLGDRS   AFK TGIT 
Sbjct: 132 -----VATITHQSHLCPLPLTVQPNIWNYDHCLYLYPTPHTIVLGDRSLWNAFKNTGITY 186

Query: 505 FNPGSFSIDSTFVVYRPCSQE 525
           FN  SFSIDST V Y PCSQE
Sbjct: 187 FNTSSFSIDSTSVAYCPCSQE 207