Miyakogusa Predicted Gene

Lj2g3v0621780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0621780.1 CUFF.34898.1
         (108 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g37880.1                                                        62   1e-10
Glyma12g11520.1                                                        60   5e-10
Glyma12g32580.1                                                        60   5e-10

>Glyma13g37880.1 
          Length = 227

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/39 (76%), Positives = 33/39 (84%), Gaps = 2/39 (5%)

Query: 60  SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
           SGS+ GGT+AKDA+GN V AE  LK HGPGDRTLTQGLK
Sbjct: 95  SGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRTLTQGLK 133


>Glyma12g11520.1 
          Length = 129

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/39 (74%), Positives = 33/39 (84%), Gaps = 2/39 (5%)

Query: 60  SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
           +G +TGGT+AKD IGN V AE  L+THGPGDRTLTQGLK
Sbjct: 91  AGPSTGGTVAKDPIGNDVIAEKWLETHGPGDRTLTQGLK 129


>Glyma12g32580.1 
          Length = 227

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 2/39 (5%)

Query: 60  SGSATGGTIAKDAIGNYVFAE--LKTHGPGDRTLTQGLK 96
           SGS+ GGT+AKDA+GN V AE  LK HGPGDRTL QGLK
Sbjct: 95  SGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRTLAQGLK 133