Miyakogusa Predicted Gene
- Lj2g3v0621350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0621350.1 tr|D7KD08|D7KD08_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_681800
PE,32.6,0.0000000000002,seg,NULL; coiled-coil,NULL;
KIP1,KIP1-like,CUFF.34867.1
(374 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g29630.1 416 e-116
Glyma16g34210.1 413 e-115
Glyma16g34210.2 121 1e-27
Glyma02g17150.1 62 1e-09
Glyma03g36740.1 60 4e-09
Glyma01g44680.1 59 7e-09
Glyma11g00910.1 59 8e-09
Glyma20g28750.1 57 3e-08
Glyma10g39070.1 57 3e-08
Glyma19g34130.1 57 3e-08
Glyma03g31290.1 57 3e-08
Glyma09g33200.1 57 4e-08
Glyma02g16380.1 56 6e-08
Glyma10g03450.1 56 6e-08
Glyma01g02810.1 55 9e-08
Glyma04g10160.1 54 3e-07
Glyma03g36740.3 54 3e-07
Glyma19g39380.1 54 4e-07
Glyma18g05790.1 54 4e-07
Glyma11g31390.1 54 4e-07
Glyma14g38570.1 52 7e-07
Glyma02g40300.1 52 1e-06
>Glyma09g29630.1
Length = 324
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/331 (70%), Positives = 251/331 (75%), Gaps = 20/331 (6%)
Query: 51 DLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSDRYIQTLA 110
DLEERMK+LAM+T EDEEMGDTFA+RAETYYQKRPQLLSLLQDLYNGYITLSDRYIQTLA
Sbjct: 7 DLEERMKVLAMSTTEDEEMGDTFADRAETYYQKRPQLLSLLQDLYNGYITLSDRYIQTLA 66
Query: 111 XXXXXXXXXXXXQ-VEGGFSDQEE-VSGVSQVDSDIESSISYQQ-----MPVMILPGSSM 163
V+ GFSDQEE SGVS DSDIESSISYQ MP+ LP SSM
Sbjct: 67 KHKHHSRHSSQVSTVDEGFSDQEEEASGVSHSDSDIESSISYQHPQHMMMPIG-LPKSSM 125
Query: 164 LDVDAFVAELVIKNVEHDILMHEVSVMERKYCESSRKNELQKXXXXXXXXXXXXXXXXXA 223
LDVDA VAEL+I+N+E+D+LMHEV VMER+YCESSRK+ELQK A
Sbjct: 126 LDVDAIVAELLIRNIEYDMLMHEVGVMERRYCESSRKSELQKSLLEVLESERIVLLNENA 185
Query: 224 GLSYRVNTLVEENKDLASESVFIKRKAGELAKCVLKMREDHRVYLLHKKIEDLQAQIHGL 283
L YRVNTLVEENK+LASESVFIKRKAGELAKCVLKMREDHRVYLLH+KIEDLQAQIH L
Sbjct: 186 SLGYRVNTLVEENKELASESVFIKRKAGELAKCVLKMREDHRVYLLHRKIEDLQAQIHAL 245
Query: 284 EKRNKEYYEKLLRRXXXXXXXXXXXXXXXXXXXIALEVRVQLNKLRRFKWKDGNGSGTPG 343
EKRNKEYY+KLLRR +ALEV VQ++K +RFKWKDGN SG
Sbjct: 246 EKRNKEYYDKLLRR----------DGHEDGKKGVALEVCVQMDKQKRFKWKDGNTSGM-- 293
Query: 344 KKFEGVKKGPSLWKKLKNMDLLLCGTNPTCA 374
KKF G K PSLWKKLKNMDLLLCGTNPTCA
Sbjct: 294 KKFHGKKSPPSLWKKLKNMDLLLCGTNPTCA 324
>Glyma16g34210.1
Length = 325
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/332 (70%), Positives = 252/332 (75%), Gaps = 21/332 (6%)
Query: 51 DLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSDRYIQTLA 110
DLEERMK+LAM+T E+EEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSDRYIQTLA
Sbjct: 7 DLEERMKVLAMSTTEEEEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSDRYIQTLA 66
Query: 111 XXXXXXXXXXX-XQVEGGFSDQEEVSGVSQVDSDIESSISYQQMPVMI-----LPGSS-- 162
V+ GFSDQEE SGVS DSDIESSISYQ P M+ LP SS
Sbjct: 67 KHKHHSRHSSQVSTVDEGFSDQEEASGVSHSDSDIESSISYQHPPPMMMMPIGLPRSSSM 126
Query: 163 MLDVDAFVAELVIKNVEHDILMHEVSVMERKYCESSRKNELQKXXXXXXXXXXXXXXXXX 222
+LDVDA AELV++NVE+D+L+HEV VMER+YCESSRK+ELQK
Sbjct: 127 LLDVDAIYAELVMRNVEYDLLVHEVGVMERRYCESSRKSELQKSLLEVLESERIVLLNEN 186
Query: 223 AGLSYRVNTLVEENKDLASESVFIKRKAGELAKCVLKMREDHRVYLLHKKIEDLQAQIHG 282
A LSYRVNTLVEENK+LASESVFIKRKAGELAKCVLKMREDHRVYLLH+KIEDLQAQIHG
Sbjct: 187 ASLSYRVNTLVEENKELASESVFIKRKAGELAKCVLKMREDHRVYLLHRKIEDLQAQIHG 246
Query: 283 LEKRNKEYYEKLLRRXXXXXXXXXXXXXXXXXXXIALEVRVQLNKLRRFKWKDGNGSGTP 342
LEKRNKEYYEKLLRR +ALEV VQL+K +RFKWKDGN T
Sbjct: 247 LEKRNKEYYEKLLRR---------DVQEDVGKKGVALEVCVQLDKHKRFKWKDGN---TS 294
Query: 343 GKKFEGVKKGPSLWKKLKNMDLLLCGTNPTCA 374
GKKF G KK PSLWKKLKNMDLLLCG NPTCA
Sbjct: 295 GKKFHG-KKSPSLWKKLKNMDLLLCGANPTCA 325
>Glyma16g34210.2
Length = 105
Score = 121 bits (304), Expect = 1e-27, Method: Composition-based stats.
Identities = 66/99 (66%), Positives = 69/99 (69%), Gaps = 13/99 (13%)
Query: 276 LQAQIHGLEKRNKEYYEKLLRRXXXXXXXXXXXXXXXXXXXIALEVRVQLNKLRRFKWKD 335
L AQIHGLEKRNKEYYEKLLRR +ALEV VQL+K +RFKWKD
Sbjct: 20 LIAQIHGLEKRNKEYYEKLLRRDVQEDVGKKG---------VALEVCVQLDKHKRFKWKD 70
Query: 336 GNGSGTPGKKFEGVKKGPSLWKKLKNMDLLLCGTNPTCA 374
GN T GKKF G KK PSLWKKLKNMDLLLCG NPTCA
Sbjct: 71 GN---TSGKKFHG-KKSPSLWKKLKNMDLLLCGANPTCA 105
>Glyma02g17150.1
Length = 469
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 37 NNNIMPSWLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLYN 96
N+ WL +++++L E+ K + ED D+FA+RAE YY+KRPQL+S+++D Y
Sbjct: 16 NHTRRSPWLQSTLTELNEKTKAMLKLIEED---ADSFAQRAEMYYKKRPQLVSMVEDFYR 72
Query: 97 GYITLSDRYIQT 108
+ +L++RY Q
Sbjct: 73 THRSLAERYDQV 84
>Glyma03g36740.1
Length = 577
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 36 TNNNIMPSWLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLY 95
T +N P WL +++S+L E+ + + ED D+FA+RAE YY+KRP+L+S+++D Y
Sbjct: 19 TTSNRSP-WLQSTLSELNEKTRAMLKLIEED---ADSFAKRAEMYYKKRPELVSMVEDFY 74
Query: 96 NGYITLSDRYIQ 107
+ +L++RY Q
Sbjct: 75 RTHRSLAERYDQ 86
>Glyma01g44680.1
Length = 1743
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 44 WLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSD 103
WL +++D++ ++K AM + DEE D+FA RAE YY+KRP+L+ L+++ Y Y L++
Sbjct: 27 WLQENLADIDTKVK--AMIKLIDEE-ADSFARRAEMYYKKRPELMKLVEEFYRAYRALAE 83
Query: 104 RY 105
RY
Sbjct: 84 RY 85
>Glyma11g00910.1
Length = 1740
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 44 WLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSD 103
WL +++D++ ++K AM + DEE D+FA RAE YY+KRP+L+ L+++ Y Y L++
Sbjct: 27 WLQENLADIDTKVK--AMIKLIDEE-ADSFARRAEMYYKKRPELMKLVEEFYRAYRALAE 83
Query: 104 RY 105
RY
Sbjct: 84 RY 85
>Glyma20g28750.1
Length = 1757
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 44 WLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSD 103
WL +++D++ ++K + ED D+FA RAE YY+KRP+L+ L+++ Y Y L++
Sbjct: 28 WLQENLTDMDAKVKAMIKLIEED---ADSFARRAEMYYKKRPELMKLVEEFYRAYRALAE 84
Query: 104 RY 105
RY
Sbjct: 85 RY 86
>Glyma10g39070.1
Length = 1804
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 44 WLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSD 103
WL +++D++ ++K + ED D+FA RAE YY+KRP+L+ L+++ Y Y L++
Sbjct: 28 WLQENLTDMDAKVKAMIKLIEED---ADSFARRAEMYYKKRPELMKLVEEFYRAYRALAE 84
Query: 104 RY 105
RY
Sbjct: 85 RY 86
>Glyma19g34130.1
Length = 1759
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 44 WLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSD 103
WL +++D++ ++K + ED D+FA RAE YY+KRP+L+ L+++ Y Y L++
Sbjct: 28 WLQENLTDMDSKVKQMIKLIEED---ADSFARRAEMYYKKRPELMKLVEEFYRAYRALAE 84
Query: 104 RY 105
RY
Sbjct: 85 RY 86
>Glyma03g31290.1
Length = 1830
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 44 WLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSD 103
WL +++D++ ++K + ED D+FA RAE YY+KRP+L+ L+++ Y Y L++
Sbjct: 28 WLQENLTDMDSKVKQMIKLIEED---ADSFARRAEMYYKKRPELMKLVEEFYRAYRALAE 84
Query: 104 RY 105
RY
Sbjct: 85 RY 86
>Glyma09g33200.1
Length = 956
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Query: 44 WLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSD 103
W+ ++ D+EE+++ + + +E+E GD+FA+RAE YY++RP+L+S +++ + Y L++
Sbjct: 25 WMEQNLQDMEEKVQTV-LKLLEEE--GDSFAKRAEMYYKRRPELISFVEESFKAYRALAE 81
Query: 104 RY 105
RY
Sbjct: 82 RY 83
>Glyma02g16380.1
Length = 1882
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 44 WLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSD 103
WL +++D++ ++K + ED D+FA RAE YY+KRP+L+ ++++ Y Y L++
Sbjct: 28 WLQENLTDMDAKVKQMIKLIEED---ADSFARRAEMYYKKRPELMKMVEEFYRAYRALAE 84
Query: 104 RY 105
RY
Sbjct: 85 RY 86
>Glyma10g03450.1
Length = 2100
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 44 WLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSD 103
WL +++D++ ++K + ED D+FA RAE YY+KRP+L+ ++++ Y Y L++
Sbjct: 28 WLQENLTDMDAKVKQMIKLIEED---ADSFARRAEMYYKKRPELMKMVEEFYRAYRALAE 84
Query: 104 RY 105
RY
Sbjct: 85 RY 86
>Glyma01g02810.1
Length = 977
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Query: 44 WLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSD 103
W+ ++ D+EE+++ + + +E+E GD+FA+RAE YY++RP+L+S +++ + Y L++
Sbjct: 25 WMEQNLLDMEEKVQTV-LKLLEEE--GDSFAKRAEMYYKRRPELISFVEESFKAYRALAE 81
Query: 104 RY 105
RY
Sbjct: 82 RY 83
>Glyma04g10160.1
Length = 859
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 3/62 (4%)
Query: 44 WLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSD 103
WL S+ D+E+ M +N + +E G++F++RAE YY+KRPQL+ +++++ Y L++
Sbjct: 25 WLEQSLRDMEDVMAE-TLNIIHNE--GESFSQRAEMYYRKRPQLVGYVEEVFRSYRALAE 81
Query: 104 RY 105
RY
Sbjct: 82 RY 83
>Glyma03g36740.3
Length = 212
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 34/43 (79%)
Query: 67 EEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSDRYIQTL 109
EE D+FA+RAE YY+KRP+L+S+++D Y + +L++RY Q +
Sbjct: 6 EEDADSFAKRAEMYYKKRPELVSMVEDFYRTHRSLAERYDQIM 48
>Glyma19g39380.1
Length = 185
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 33/42 (78%)
Query: 67 EEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSDRYIQT 108
EE D+FA+RAE YY+KRP+L+S+++D Y + +L++RY Q
Sbjct: 16 EEDADSFAKRAEMYYKKRPELVSMVEDFYRAHRSLAERYDQV 57
>Glyma18g05790.1
Length = 512
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 33/39 (84%)
Query: 67 EEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSDRY 105
EE GD+FA++AE YY+KRP+L+SL+++ Y Y ++++R+
Sbjct: 13 EEDGDSFAQKAEMYYKKRPELISLVEEFYRAYKSMAERF 51
>Glyma11g31390.1
Length = 506
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 33/39 (84%)
Query: 67 EEMGDTFAERAETYYQKRPQLLSLLQDLYNGYITLSDRY 105
EE GD+FA++AE YY+KRP+L+SL+++ Y Y ++++R+
Sbjct: 13 EEDGDSFAQKAEMYYKKRPELISLVEEFYRAYKSMAERF 51
>Glyma14g38570.1
Length = 627
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 37 NNNIMPS---WLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQD 93
+++I P WL ++ +++ +K + ED D+FA++AE YYQKRP+L++L+++
Sbjct: 30 DSHISPKNSKWLFENLEEMDRSVKRMLKLIEED---ADSFAKKAEMYYQKRPELVALVEE 86
Query: 94 LYNGYITLSDRY 105
Y Y L++RY
Sbjct: 87 FYRVYRALAERY 98
>Glyma02g40300.1
Length = 610
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 37 NNNIMPS---WLVTSISDLEERMKMLAMNTMEDEEMGDTFAERAETYYQKRPQLLSLLQD 93
+++I P WL ++ +++ +K + ED D+FA++AE YYQKRP+L++L+++
Sbjct: 15 DSHISPKNSKWLSENLEEMDRSVKRMLKLIEED---ADSFAKKAEMYYQKRPELVALVEE 71
Query: 94 LYNGYITLSDRY 105
Y Y L++RY
Sbjct: 72 FYRVYRALAERY 83