Miyakogusa Predicted Gene

Lj2g3v0581790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0581790.1 Non Chatacterized Hit- tr|G7KL50|G7KL50_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,47.06,0.000000006,coiled-coil,NULL; C2H2 and C2HC zinc
fingers,NULL; BED zinc finger,Zinc finger, BED-type predicted;
,CUFF.34758.1
         (399 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g15130.2                                                        51   2e-06

>Glyma09g15130.2 
          Length = 672

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 19 NSSKRPK-MTSKVWEEMQRIQTSDGSKVLCKHCGKLL--QDNCGTSHLKRHLTICPKR 73
          + +K+PK +TS VW   +RI+ +D    +C HC K L    N GT+HL+ HL  C KR
Sbjct: 7  SGTKKPKRLTSVVWNHFERIRKADICYAVCVHCNKKLSGSSNSGTTHLRNHLMRCLKR 64