Miyakogusa Predicted Gene

Lj2g3v0571450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0571450.1 tr|G7I4M0|G7I4M0_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_1g042650 PE=4 SV=1,37.86,3e-19,domain in
FBox and BRCT domain containing pl,FBD; FAMILY NOT NAMED,NULL;
FBD,FBD,CUFF.34771.1
         (137 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g46590.2                                                       115   2e-26
Glyma18g35320.1                                                        98   3e-21
Glyma17g05620.1                                                        97   5e-21
Glyma08g46320.1                                                        94   3e-20
Glyma18g35330.1                                                        92   1e-19
Glyma18g35360.1                                                        71   4e-13
Glyma18g35370.1                                                        71   4e-13
Glyma08g46590.1                                                        70   7e-13
Glyma13g43040.1                                                        55   2e-08
Glyma13g40060.1                                                        54   4e-08

>Glyma08g46590.2 
          Length = 380

 Score =  115 bits (287), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 80/135 (59%), Gaps = 5/135 (3%)

Query: 2   FHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYPP 61
           F NLTH++L YS    +W +V+E+++ CP LQ+L ID   +  +  D+   E   W +P 
Sbjct: 247 FQNLTHLELGYSECTRDWVDVLEVIQRCPNLQILDIDMGSIDMTTRDD---EGADWPFPR 303

Query: 62  CVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLKK 121
            VP  I LHLK C +  + G+KGE  FARYIM+ AR L+ M IST   + Q  K  +LKK
Sbjct: 304 SVPSSISLHLKTCFIRCYGGSKGELRFARYIMRNARHLRTMKISTYASRQQ--KFNMLKK 361

Query: 122 FYLCTRGSATCKFTF 136
             LC R S  CK +F
Sbjct: 362 LSLCPRRSRICKLSF 376


>Glyma18g35320.1 
          Length = 345

 Score = 97.8 bits (242), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/135 (42%), Positives = 78/135 (57%), Gaps = 12/135 (8%)

Query: 2   FHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYPP 61
           F NLTH++  + +Y   +  V++L+K CPKLQ+L I + D        F E      YP 
Sbjct: 222 FQNLTHLE--FFSYRGGFF-VLDLIKRCPKLQILTIYKVDSAL-----FAE----GDYPQ 269

Query: 62  CVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLKK 121
            VP CI  HLK C L  + G+K EF F  YIM+ +++LQ MTIS   D N+  KLE+ +K
Sbjct: 270 SVPICISFHLKICTLKRYNGSKDEFRFVTYIMENSKYLQIMTISCNSDINKERKLEMFQK 329

Query: 122 FYLCTRGSATCKFTF 136
             LCTR S +CK  F
Sbjct: 330 LSLCTRCSTSCKLLF 344


>Glyma17g05620.1 
          Length = 158

 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 64/117 (54%), Gaps = 11/117 (9%)

Query: 31  KLQVLVIDQP---------DVHFSGID--EFKEEVGVWQYPPCVPECILLHLKRCCLNGF 79
           KL    +DQP            +S  D   +  +   W YP  +P C+ LHLK C L  +
Sbjct: 41  KLSYFHLDQPLKRLRHCVRSSRYSPADVKAWLADAAYWSYPQSIPTCVSLHLKTCRLTNY 100

Query: 80  IGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLKKFYLCTRGSATCKFTF 136
           +G+KGEF+FARYIMQ A  LQ MTI T    N+  KLE+++    CTR SATCK  F
Sbjct: 101 VGSKGEFQFARYIMQNASHLQTMTICTNTSSNEGEKLEMIENLSSCTRCSATCKLLF 157


>Glyma08g46320.1 
          Length = 379

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 14/141 (9%)

Query: 1   MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
           +FHNL H+++ +  +   W  V E++K+CPKLQ  V+  P   F  +        VW +P
Sbjct: 246 VFHNLIHLEVSFW-FVVRWNLVFEMIKHCPKLQTFVLFLPLESFPPM--------VWTFP 296

Query: 61  PCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQW-----GK 115
             VPECI   L+RC +  + G K E +FA+YI+Q +R LQ MTI     +N +      K
Sbjct: 297 QIVPECISSKLRRCTIMNYKGKKYELQFAKYILQNSRALQSMTIHNKRVRNTYFANPQDK 356

Query: 116 LELLKKFYLCTRGSATCKFTF 136
           + +L++  +C + S TCK  F
Sbjct: 357 IRILQELAMCPKSSTTCKILF 377


>Glyma18g35330.1 
          Length = 342

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 7/129 (5%)

Query: 2   FHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYPP 61
           F NLTH++L++    N    ++ LL  CP LQ+LV+D+ ++       F +      YP 
Sbjct: 220 FLNLTHMELIFRFRFNVLGRLINLLHECPNLQILVVDEGNL-------FVKTSSDVSYPQ 272

Query: 62  CVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLKK 121
            VP+C+   LKRCC+  + G + E  FARY++Q AR L  MTI +    N   +L+++KK
Sbjct: 273 FVPKCLSTQLKRCCVKKYGGQESELRFARYVLQNARVLYSMTIYSISSSNSGERLQMIKK 332

Query: 122 FYLCTRGSA 130
              C R SA
Sbjct: 333 LSSCPRISA 341


>Glyma18g35360.1 
          Length = 357

 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 72/131 (54%), Gaps = 9/131 (6%)

Query: 2   FHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYPP 61
           F NLT+++L+   +  +W  +++LL  CP LQ+LVID+ +  F+     +     W Y  
Sbjct: 200 FVNLTYLELIVDAHYWDW--LLKLLHCCPNLQILVIDKGN-SFNKTSNDEN----WVYSH 252

Query: 62  CVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTI-STGMDKNQWGKLELLK 120
            VP+C+   LK C    + G + EF+FARYIMQ AR L   TI STG       K +++K
Sbjct: 253 LVPKCLSSKLKTCRFQKYEGWECEFQFARYIMQNARALCAFTICSTGFSPLA-AKFQMIK 311

Query: 121 KFYLCTRGSAT 131
           +   C R S T
Sbjct: 312 RLSSCPRISIT 322


>Glyma18g35370.1 
          Length = 409

 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 8/136 (5%)

Query: 1   MFHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYP 60
           +F  L  +++ + NY+  W  +  LL+   KL+VL I +    ++   E +     W +P
Sbjct: 281 VFDKLIQLEISFGNYS--WDLLASLLQRSHKLEVLTIYKEPQKYAKGQEPR-----WIHP 333

Query: 61  PCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKLELLK 120
             VPEC LLHLK  CL  + G + E +F  YIMQ AR L+ MTI          KL++ +
Sbjct: 334 LLVPEC-LLHLKTFCLREYQGLETELDFVGYIMQNARVLETMTIYISSSLGSEEKLQIRR 392

Query: 121 KFYLCTRGSATCKFTF 136
              +  R   TC+  F
Sbjct: 393 HLSILQRNFETCQIVF 408


>Glyma08g46590.1 
          Length = 515

 Score = 70.1 bits (170), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 3/83 (3%)

Query: 2   FHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQPDVHFSGIDEFKEEVGVWQYPP 61
           F NLTH++L YS    +W +V+E+++ CP LQ+L ID   +  +  D   +E   W +P 
Sbjct: 425 FQNLTHLELGYSECTRDWVDVLEVIQRCPNLQILDIDMGSIDMTTRD---DEGADWPFPR 481

Query: 62  CVPECILLHLKRCCLNGFIGTKG 84
            VP  I LHLK C +  + G+KG
Sbjct: 482 SVPSSISLHLKTCFIRCYGGSKG 504


>Glyma13g43040.1 
          Length = 248

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/38 (63%), Positives = 30/38 (78%)

Query: 2   FHNLTHIKLVYSNYNNNWAEVVELLKYCPKLQVLVIDQ 39
           FHNLT I+  YS +N NW EV+++LK+CP LQ LVIDQ
Sbjct: 173 FHNLTRIEFSYSEHNRNWMEVLKVLKHCPNLQHLVIDQ 210


>Glyma13g40060.1 
          Length = 146

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 2/60 (3%)

Query: 57  WQYPPCVPECILLHLKRCCLNGFIGTKGEFEFARYIMQKARFLQRMTISTGMDKNQWGKL 116
           WQYP  VP+CI  HLK C +N + G + EFEFARYIM  +  + ++T++   D + W +L
Sbjct: 12  WQYPLYVPKCIPSHLKTCRINNYGGHETEFEFARYIMFSS--ICKLTVNCLDDNDIWVRL 69