Miyakogusa Predicted Gene

Lj2g3v0561310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0561310.1 tr|K1PKH8|K1PKH8_CRAGI UPF0415 protein
C7orf25-like protein (Fragment) OS=Crassostrea gigas PE=4
SV=,39.5,5e-19,DUF1308,Protein of unknown function DUF1308;
UNCHARACTERIZED DUF1308,Protein of unknown function DUF,CUFF.34726.1
         (123 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g33630.1                                                       232   7e-62
Glyma09g29090.1                                                       225   1e-59
Glyma20g05030.1                                                        96   1e-20

>Glyma16g33630.1 
          Length = 443

 Score =  232 bits (591), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 110/122 (90%), Positives = 115/122 (94%)

Query: 2   SELQNPIHVEFSRILCGKNGIICESVLTEFKELVLMCGGPNEKLRADKLINCLRVVPDDP 61
           SE+QNPIH+EF RIL GKNG+ICESVLTEFKELV MCGGPNEKLRAD LINCLRVVPD P
Sbjct: 322 SEIQNPIHMEFDRILRGKNGLICESVLTEFKELVSMCGGPNEKLRADWLINCLRVVPDTP 381

Query: 62  SDRMMGLPTTRKLALKNKVVFGTGDQWHAPTLTANMAFARAVSQTGMSLSTIEHRPRALT 121
           S+RMMGLP+TRKLALKNKVVFGTGD WHAPTLTANMAF RAVSQTGMSLSTIEHRPRALT
Sbjct: 382 SERMMGLPSTRKLALKNKVVFGTGDHWHAPTLTANMAFVRAVSQTGMSLSTIEHRPRALT 441

Query: 122 GD 123
           GD
Sbjct: 442 GD 443


>Glyma09g29090.1 
          Length = 495

 Score =  225 bits (573), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 105/123 (85%), Positives = 112/123 (91%)

Query: 1   MSELQNPIHVEFSRILCGKNGIICESVLTEFKELVLMCGGPNEKLRADKLINCLRVVPDD 60
           MSE+QNPIH+EF RILCGKNG+ICESVL EFKELV MCGGPNEKLR+D+LINCL+VV D 
Sbjct: 373 MSEIQNPIHMEFGRILCGKNGLICESVLMEFKELVSMCGGPNEKLRSDRLINCLKVVLDT 432

Query: 61  PSDRMMGLPTTRKLALKNKVVFGTGDQWHAPTLTANMAFARAVSQTGMSLSTIEHRPRAL 120
           PS+RMM LPTTRKLALKNKVVFGTGD WHAPTLT NMAF RAVSQTGMSLST EHRPRAL
Sbjct: 433 PSERMMDLPTTRKLALKNKVVFGTGDHWHAPTLTTNMAFVRAVSQTGMSLSTFEHRPRAL 492

Query: 121 TGD 123
            GD
Sbjct: 493 PGD 495


>Glyma20g05030.1 
          Length = 111

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 48/55 (87%)

Query: 1   MSELQNPIHVEFSRILCGKNGIICESVLTEFKELVLMCGGPNEKLRADKLINCLR 55
           MSE+QNPIH+EF R L GKNG+ICESVL E KE V MCGGPNEKLRAD+LINCLR
Sbjct: 57  MSEIQNPIHMEFGRNLRGKNGLICESVLMELKEFVSMCGGPNEKLRADRLINCLR 111