Miyakogusa Predicted Gene

Lj2g3v0561150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0561150.1 Non Chatacterized Hit- tr|H9X176|H9X176_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=C,89.55,1e-17,seg,NULL; coiled-coil,NULL,CUFF.34720.1
         (130 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g28980.1                                                       154   2e-38
Glyma16g33570.1                                                       153   5e-38
Glyma09g28980.2                                                       117   3e-27
Glyma16g33570.2                                                       116   6e-27

>Glyma09g28980.1 
          Length = 209

 Score =  154 bits (389), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/130 (63%), Positives = 84/130 (64%)

Query: 1   MAGREVREYTNLSXXXXXXXXXXXXXXXXXXVTFQRMVAKMQEVAGERGGYLHGRGALDS 60
           MAGREVREYTNLS                  +TFQRMVAKMQEVAGERGGYLHGRGALDS
Sbjct: 1   MAGREVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  DDLLYLKEQMXXXXXXXXXXXXXXXXXXXXXXXXXSLVDSSPASVPLPLRVEPKPKSGIR 120
           DDLLYLKEQM                         SL DSSPASVPL  RVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKRAASLADSSPASVPLAFRVEPKPKSGIR 120

Query: 121 QQDLLKKVVE 130
           QQDLLKKVVE
Sbjct: 121 QQDLLKKVVE 130


>Glyma16g33570.1 
          Length = 220

 Score =  153 bits (386), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 82/130 (63%), Positives = 83/130 (63%)

Query: 1   MAGREVREYTNLSXXXXXXXXXXXXXXXXXXVTFQRMVAKMQEVAGERGGYLHGRGALDS 60
           MAGREVREYTNLS                  +TFQRMVAKMQEVAGERGGYLHGRGALDS
Sbjct: 1   MAGREVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  DDLLYLKEQMXXXXXXXXXXXXXXXXXXXXXXXXXSLVDSSPASVPLPLRVEPKPKSGIR 120
           DDLLYLKEQM                         SL DSSP SVPL  RVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKRAASLADSSPTSVPLAFRVEPKPKSGIR 120

Query: 121 QQDLLKKVVE 130
           QQDLLKKVVE
Sbjct: 121 QQDLLKKVVE 130


>Glyma09g28980.2 
          Length = 169

 Score =  117 bits (293), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 62/90 (68%), Positives = 62/90 (68%)

Query: 41  MQEVAGERGGYLHGRGALDSDDLLYLKEQMXXXXXXXXXXXXXXXXXXXXXXXXXSLVDS 100
           MQEVAGERGGYLHGRGALDSDDLLYLKEQM                         SL DS
Sbjct: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKRAASLADS 60

Query: 101 SPASVPLPLRVEPKPKSGIRQQDLLKKVVE 130
           SPASVPL  RVEPKPKSGIRQQDLLKKVVE
Sbjct: 61  SPASVPLAFRVEPKPKSGIRQQDLLKKVVE 90


>Glyma16g33570.2 
          Length = 180

 Score =  116 bits (290), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/90 (67%), Positives = 61/90 (67%)

Query: 41  MQEVAGERGGYLHGRGALDSDDLLYLKEQMXXXXXXXXXXXXXXXXXXXXXXXXXSLVDS 100
           MQEVAGERGGYLHGRGALDSDDLLYLKEQM                         SL DS
Sbjct: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKRAASLADS 60

Query: 101 SPASVPLPLRVEPKPKSGIRQQDLLKKVVE 130
           SP SVPL  RVEPKPKSGIRQQDLLKKVVE
Sbjct: 61  SPTSVPLAFRVEPKPKSGIRQQDLLKKVVE 90