Miyakogusa Predicted Gene

Lj2g3v0523450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0523450.1 tr|G7KHS6|G7KHS6_MEDTR 4,5-DOPA dioxygenase
extradiol-like protein OS=Medicago truncatula
GN=MTR_6g0,72.41,1e-16,LigB,Extradiol ring-cleavage dioxygenase, class
III enzyme, subunit B; LigB subunit of an aromatic-r,CUFF.34670.1
         (267 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g33280.1                                                       489   e-138
Glyma09g28490.1                                                       408   e-114
Glyma16g33270.1                                                       395   e-110
Glyma20g35700.1                                                       332   3e-91
Glyma09g28500.1                                                       295   2e-80
Glyma16g33290.1                                                        74   2e-13

>Glyma16g33280.1 
          Length = 266

 Score =  489 bits (1258), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 234/264 (88%), Positives = 251/264 (95%), Gaps = 1/264 (0%)

Query: 1   MALKDTFYISHGSPTLSIDESLVARKFLQSWKKEVFPPRPTSILVISGHWDTAVPTVNVV 60
           MALKDTFYISHGSPTLSIDES+ ARKFLQSWKK+VFP RP+SILVISGHW+TAVPTVNVV
Sbjct: 1   MALKDTFYISHGSPTLSIDESIQARKFLQSWKKDVFPQRPSSILVISGHWETAVPTVNVV 60

Query: 61  DSTNDTIYDFYGFPKPMYQLKYPAPGAPHLAKRVKELLKEGGFSRVDEDKKRGLDHGAWV 120
           DS NDTIYDFYGFPK MYQLKYPAPGAP LA+RVKELLK+ GFS VDED KRGLDHGAWV
Sbjct: 61  DSINDTIYDFYGFPKQMYQLKYPAPGAPQLARRVKELLKKSGFSHVDEDTKRGLDHGAWV 120

Query: 121 PLLLMYPEADIPVCQLSVQSNLDGTHHYNIGKALAPLKDEGVLIVGSGSAVHNLRALERH 180
           PL LMYPEADIPVCQ+S+QS  DGT+HYN+GKALAPLKDEGVLI+GSGSAVHNLRALE H
Sbjct: 121 PLFLMYPEADIPVCQISIQSQQDGTYHYNLGKALAPLKDEGVLIMGSGSAVHNLRALEPH 180

Query: 181 ATVAAPWAVEFDNWLKEALLEGRYEDVNHYEQKAPHAKKAHPWPDHFYPLHVAIGAAGEN 240
           +TV APWA+EFDNWLK+ALLEGRYEDVNHYEQKAPHAKKAHPWPDHFYPLHVAIGAAGE+
Sbjct: 181 STV-APWALEFDNWLKDALLEGRYEDVNHYEQKAPHAKKAHPWPDHFYPLHVAIGAAGED 239

Query: 241 SKAKLIHSSIDLGSLSYASYQFTS 264
           +KAKLIHSSI+LGSLSYASYQFTS
Sbjct: 240 AKAKLIHSSIELGSLSYASYQFTS 263


>Glyma09g28490.1 
          Length = 303

 Score =  408 bits (1049), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 197/264 (74%), Positives = 225/264 (85%), Gaps = 2/264 (0%)

Query: 1   MALKDTFYISHGSPTLSIDESLVARKFLQSWKKEVFPPRPTSILVISGHWDTAVPTVNVV 60
           + LK+TFY+SHG+PTL++D+S+ A  F  SWK E FP RP+SIL+IS HWDT VPTVNVV
Sbjct: 39  LRLKETFYLSHGAPTLAVDDSIPAWNFFNSWK-EQFPTRPSSILIISAHWDTHVPTVNVV 97

Query: 61  DSTNDTIYDFYGFPKPMYQLKYPAPGAPHLAKRVKELLKEGGFSRVDEDKKRGLDHGAWV 120
              NDTIYDFYGFPK MY+LKYPAPGAPHLAKRVKELL   GFS VDEDKKRGLDHGAWV
Sbjct: 98  HQ-NDTIYDFYGFPKSMYKLKYPAPGAPHLAKRVKELLLGSGFSHVDEDKKRGLDHGAWV 156

Query: 121 PLLLMYPEADIPVCQLSVQSNLDGTHHYNIGKALAPLKDEGVLIVGSGSAVHNLRALERH 180
           PLLLMYPEADIPVCQLS+ SN  GT+HYN+GKALAPLKDEGVLIVGSGSA HNLRA+   
Sbjct: 157 PLLLMYPEADIPVCQLSISSNKGGTYHYNMGKALAPLKDEGVLIVGSGSATHNLRAIAPR 216

Query: 181 ATVAAPWAVEFDNWLKEALLEGRYEDVNHYEQKAPHAKKAHPWPDHFYPLHVAIGAAGEN 240
            T  APWA  F +WLK +LL+GRYE+VN YE+KAP+AK AHPWPDHF+PLHVA+GAAGEN
Sbjct: 217 GTPPAPWASAFMSWLKTSLLDGRYEEVNEYEEKAPYAKMAHPWPDHFFPLHVAMGAAGEN 276

Query: 241 SKAKLIHSSIDLGSLSYASYQFTS 264
           SKAK++H S D GS+SYAS+ FT+
Sbjct: 277 SKAKVVHDSWDGGSMSYASFGFTT 300


>Glyma16g33270.1 
          Length = 269

 Score =  395 bits (1016), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/264 (71%), Positives = 222/264 (84%), Gaps = 2/264 (0%)

Query: 1   MALKDTFYISHGSPTLSIDESLVARKFLQSWKKEVFPPRPTSILVISGHWDTAVPTVNVV 60
           + LK+TFY+SHG+P+L ID+S+ A  F  SWK E FP +P+SILVIS HWDT VPTVNVV
Sbjct: 5   LKLKETFYLSHGAPSLVIDDSIPAWHFFNSWK-EQFPTKPSSILVISAHWDTHVPTVNVV 63

Query: 61  DSTNDTIYDFYGFPKPMYQLKYPAPGAPHLAKRVKELLKEGGFSRVDEDKKRGLDHGAWV 120
           D  NDTIYDF GFPK MY+LKYPAPGAP LAKRVKELL   GFS VDEDKKRGLDHGAWV
Sbjct: 64  DQ-NDTIYDFSGFPKSMYKLKYPAPGAPQLAKRVKELLLGSGFSHVDEDKKRGLDHGAWV 122

Query: 121 PLLLMYPEADIPVCQLSVQSNLDGTHHYNIGKALAPLKDEGVLIVGSGSAVHNLRALERH 180
           PL LMYPEADIPVCQLS+ SN  GT+HYN+GKALAPLKDEGVLI+GSGSA HNLRA+   
Sbjct: 123 PLFLMYPEADIPVCQLSISSNKGGTYHYNMGKALAPLKDEGVLIIGSGSATHNLRAMAPR 182

Query: 181 ATVAAPWAVEFDNWLKEALLEGRYEDVNHYEQKAPHAKKAHPWPDHFYPLHVAIGAAGEN 240
            +  APWA  F +WL+ +LL+GRYE+VN +E+KAP+AK AHPWPDHF+PLHVA+GAAGEN
Sbjct: 183 GSPPAPWASAFMSWLETSLLDGRYEEVNEFEEKAPYAKMAHPWPDHFFPLHVAMGAAGEN 242

Query: 241 SKAKLIHSSIDLGSLSYASYQFTS 264
           +KAK++H S D GS+SYAS+ FT+
Sbjct: 243 AKAKVVHDSWDAGSISYASFGFTT 266


>Glyma20g35700.1 
          Length = 250

 Score =  332 bits (850), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 169/266 (63%), Positives = 207/266 (77%), Gaps = 21/266 (7%)

Query: 1   MALKDTFYISHGSPTLSIDESLVARKFLQSWKKEVFPPRPTSILVISGHWDTAVPTVNVV 60
           MALKDTF+ISHGS T+SID+S+ A +FL SWK EV P R +SILVISGHWDT VPTVNVV
Sbjct: 1   MALKDTFFISHGSSTISIDDSIPAWEFLTSWK-EVLPQRFSSILVISGHWDTDVPTVNVV 59

Query: 61  DSTNDTIYDFYGFPKPMYQLKYPAP--GAPHLAKRVKELLKEGGFSRVDEDKKRGLDHGA 118
           D  N TIYD+YGFPK MY+    +   GAPH+AKRVKELL+  GFS+VDED+K G DHGA
Sbjct: 60  DH-NKTIYDYYGFPKVMYKKTKVSSTRGAPHVAKRVKELLEASGFSKVDEDRKGGHDHGA 118

Query: 119 WVPLLLMYPEADIPVCQLSVQSNLDGTHHYNIGKALAPLKDEGVLIVGSGSAVHNLRALE 178
           WVPL+L                 +DGT+HYN+GK LAPLKD+ VLI+ SGSA+HNLRA+ 
Sbjct: 119 WVPLML-----------------IDGTYHYNLGKVLAPLKDQDVLIIRSGSALHNLRAIG 161

Query: 179 RHATVAAPWAVEFDNWLKEALLEGRYEDVNHYEQKAPHAKKAHPWPDHFYPLHVAIGAAG 238
              +  APWA+ FD+WLK +L+EGRYE+VN +++KAP+AK AHPWPDHF+PLHVA+GAAG
Sbjct: 162 PRNSPTAPWALAFDSWLKNSLIEGRYEEVNKFDEKAPYAKLAHPWPDHFFPLHVAMGAAG 221

Query: 239 ENSKAKLIHSSIDLGSLSYASYQFTS 264
           ENSKAK++H S D GS+S AS+ FT+
Sbjct: 222 ENSKAKIVHHSWDAGSISCASFGFTA 247


>Glyma09g28500.1 
          Length = 271

 Score =  295 bits (756), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 167/289 (57%), Positives = 190/289 (65%), Gaps = 46/289 (15%)

Query: 1   MALKDTFYISHGSPTLSIDESLVARKFLQSWKKEVFPPRP----TSILVISGHWD----- 51
           M LK T YISHGSPTLSIDE + ARKFLQSWKK+VFP  P    +S+L ++  +      
Sbjct: 1   MMLKITLYISHGSPTLSIDEYIDARKFLQSWKKDVFPQNPFQYLSSLLTVTLQFHPSTLL 60

Query: 52  TAVPTVNVVDSTNDTIYDFYGFPKPMYQLKYPAPGAPHLAKRVKELLKEGGFSRVDEDKK 111
           T   T +++  T+      Y + +  Y  KYPAPGAP LA+RVKELL + GFSRVDED K
Sbjct: 61  TPSTTPSMISITSPNKCTRYIYIQISYIHKYPAPGAPQLARRVKELLIKSGFSRVDEDTK 120

Query: 112 RGLDHGAWVPLLLMYPEADIPVCQLSVQSNLDGTHHYNIGKALAPLKDEGVLIVGSGSAV 171
            GLDHGA VPL LMYPEADIPVCQLSVQS  DGT+HYN GKALAPLKDE VLI+GSG   
Sbjct: 121 PGLDHGARVPLFLMYPEADIPVCQLSVQSQQDGTYHYNFGKALAPLKDESVLIIGSG--- 177

Query: 172 HNLRALERHATVAAPWAVEFDNWLKEALLEGR------------YED----VNHYEQKAP 215
                             +F NWLK+ALLEGR            Y D    V   +    
Sbjct: 178 ------------------KFYNWLKDALLEGRELFRSSLIGLKDYCDSGMMVYCIDLITI 219

Query: 216 HAKKAHPWPDHFYPLHVAIGAAGENSKAKLIHSSIDLGSLSYASYQFTS 264
           +   AHPWPDHFYPLHVAIGAAGEN+K KLIHSSIDLG+LSYASYQFTS
Sbjct: 220 YQDTAHPWPDHFYPLHVAIGAAGENAKVKLIHSSIDLGTLSYASYQFTS 268


>Glyma16g33290.1 
          Length = 42

 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/42 (83%), Positives = 40/42 (95%), Gaps = 1/42 (2%)

Query: 220 AHPWPDHFY-PLHVAIGAAGENSKAKLIHSSIDLGSLSYASY 260
           AHPWPDHFY PLHVAIGAAGEN+KAKLIH+SI++G+LSYA Y
Sbjct: 1   AHPWPDHFYHPLHVAIGAAGENAKAKLIHNSIEMGTLSYAFY 42