Miyakogusa Predicted Gene
- Lj2g3v0486960.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0486960.1 Non Chatacterized Hit- tr|C0PJ22|C0PJ22_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,64.29,0.0000000000005,Clp_N,Clp, N-terminal; no
description,Double Clp-N motif; Double Clp-N motif,NULL; seg,NULL;
SUBFAMI,CUFF.34634.1
(256 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g28050.1 369 e-102
Glyma16g32900.1 342 2e-94
Glyma16g32910.1 298 4e-81
Glyma09g28040.1 249 1e-66
Glyma01g42210.1 206 2e-53
Glyma11g25870.1 81 1e-15
Glyma02g35060.1 72 6e-13
Glyma08g01140.1 59 5e-09
Glyma05g38510.1 59 6e-09
Glyma06g17360.1 59 6e-09
Glyma04g37740.2 57 1e-08
Glyma04g37740.1 57 2e-08
>Glyma09g28050.1
Length = 252
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/257 (75%), Positives = 206/257 (80%), Gaps = 18/257 (7%)
Query: 8 LPIHPNPPHKTSL--------FTPMASIPTFSSLTTIXXXXXXXXXXXXCTLPLTSLFGT 59
LP++P P KTSL PMASIPT S CTLP TSLFGT
Sbjct: 6 LPLYPTPLPKTSLSASHFSLHLLPMASIPTLS----------LSNPNNHCTLPPTSLFGT 55
Query: 60 RITLHRPASSRSLHLNTNCRATSATVSFSLPTPKPQPDAPEKVPKWSARSIKSFAMGELE 119
RITL R SS NTNCRATSATVSFSLPTPKP D PEK PKWSAR+IKS+AMGELE
Sbjct: 56 RITLLRATSSSRSLPNTNCRATSATVSFSLPTPKPLSDTPEKTPKWSARAIKSYAMGELE 115
Query: 120 ARKLKYPTTGTEALLMGILVEGTSKAAKFLRANGITLFKVRDETVELLGKSDMYFFSPEH 179
ARKLKYP TGTEALLMGILVEGTSKAAKF RANGITLFKVR+ETVELLGKSD+YFFSPEH
Sbjct: 116 ARKLKYPNTGTEALLMGILVEGTSKAAKFSRANGITLFKVREETVELLGKSDLYFFSPEH 175
Query: 180 PPLTEPARKALDWAIDEKLKSGGEGEINVAHLLLGIWSQKESAGQQILAGLGFNDEKAKE 239
PPLTEPA+KALDWAI+EKLKSG GEINV HLLLGIWSQKESAGQQILA LGFNDEKAKE
Sbjct: 176 PPLTEPAQKALDWAIEEKLKSGEGGEINVTHLLLGIWSQKESAGQQILATLGFNDEKAKE 235
Query: 240 LAKSVDGDIDLSYRRTA 256
L+KS+DGD+DLS++R A
Sbjct: 236 LSKSIDGDVDLSFKRQA 252
>Glyma16g32900.1
Length = 264
Score = 342 bits (878), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 182/243 (74%), Positives = 192/243 (79%), Gaps = 6/243 (2%)
Query: 8 LPIHPNPPHKTSLFT----PMASIPTFSSL--TTIXXXXXXXXXXXXCTLPLTSLFGTRI 61
LP++ P KTS F+ PMASIPT SS T CTLP TSLFGTRI
Sbjct: 16 LPVYSTPLPKTSNFSLHLLPMASIPTLSSTLPTLSAHSLSHSNPNNHCTLPPTSLFGTRI 75
Query: 62 TLHRPASSRSLHLNTNCRATSATVSFSLPTPKPQPDAPEKVPKWSARSIKSFAMGELEAR 121
TL R SS NTNCRATSATVSFSLPTPKP D PEK PKWS R IKS+AMGELEAR
Sbjct: 76 TLLRATSSSHSLPNTNCRATSATVSFSLPTPKPLSDTPEKTPKWSERGIKSYAMGELEAR 135
Query: 122 KLKYPTTGTEALLMGILVEGTSKAAKFLRANGITLFKVRDETVELLGKSDMYFFSPEHPP 181
KLKYP TGTEALLMGILVEGTS AAKFLRANGITL KVR+ETV LLGKSD++FFSPEHPP
Sbjct: 136 KLKYPNTGTEALLMGILVEGTSNAAKFLRANGITLLKVREETVGLLGKSDLFFFSPEHPP 195
Query: 182 LTEPARKALDWAIDEKLKSGGEGEINVAHLLLGIWSQKESAGQQILAGLGFNDEKAKELA 241
LTEPA+KALDWAI+EKLKSG GEIN HLLLGIWSQKESAGQQILA LGFNDEKAKELA
Sbjct: 196 LTEPAQKALDWAIEEKLKSGEGGEINATHLLLGIWSQKESAGQQILATLGFNDEKAKELA 255
Query: 242 KSV 244
K+V
Sbjct: 256 KTV 258
>Glyma16g32910.1
Length = 268
Score = 298 bits (763), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/165 (86%), Positives = 154/165 (93%)
Query: 92 PKPQPDAPEKVPKWSARSIKSFAMGELEARKLKYPTTGTEALLMGILVEGTSKAAKFLRA 151
PKP D PEK PKWSAR+IKS+AMGELEARKLKYP TGTEALLMGILVEGTSKAAKFLRA
Sbjct: 104 PKPLSDTPEKTPKWSARAIKSYAMGELEARKLKYPNTGTEALLMGILVEGTSKAAKFLRA 163
Query: 152 NGITLFKVRDETVELLGKSDMYFFSPEHPPLTEPARKALDWAIDEKLKSGGEGEINVAHL 211
NGITLFKVR+ETVELLGKSD+YFFSPEHPPLTEPA+KALDWAI+EKLKSG GEINV HL
Sbjct: 164 NGITLFKVREETVELLGKSDLYFFSPEHPPLTEPAQKALDWAIEEKLKSGEGGEINVTHL 223
Query: 212 LLGIWSQKESAGQQILAGLGFNDEKAKELAKSVDGDIDLSYRRTA 256
LLGIWSQKESAGQQIL LGFNDEKAKELAK++DGD+DLS++R A
Sbjct: 224 LLGIWSQKESAGQQILDTLGFNDEKAKELAKTIDGDVDLSFKRQA 268
>Glyma09g28040.1
Length = 181
Score = 249 bits (637), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/177 (73%), Positives = 140/177 (79%), Gaps = 3/177 (1%)
Query: 24 MASIPTFSSLTTIXXXXXXXXXXXXCTLPLTSLFGTRITLHRPASSRSLHLNTNCRATSA 83
MASIP SS CTLP TSLFGTRITL R SS NT+C ATSA
Sbjct: 1 MASIPNLSSF---LPTLSHSNPNNQCTLPPTSLFGTRITLLRATSSSRSLPNTSCSATSA 57
Query: 84 TVSFSLPTPKPQPDAPEKVPKWSARSIKSFAMGELEARKLKYPTTGTEALLMGILVEGTS 143
TVSFSLPTPKP D P+K PKWS R+IKS+AMGELEARKLKYP TGTEA+LMGILVEGTS
Sbjct: 58 TVSFSLPTPKPLSDTPDKTPKWSERAIKSYAMGELEARKLKYPNTGTEAILMGILVEGTS 117
Query: 144 KAAKFLRANGITLFKVRDETVELLGKSDMYFFSPEHPPLTEPARKALDWAIDEKLKS 200
AAKFLRANGITL K R+ETVELLGKSD++FFSPEHPPLTEPA+KALDWAI+EKLKS
Sbjct: 118 NAAKFLRANGITLLKAREETVELLGKSDLFFFSPEHPPLTEPAQKALDWAIEEKLKS 174
>Glyma01g42210.1
Length = 152
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/141 (68%), Positives = 121/141 (85%)
Query: 104 KWSARSIKSFAMGELEARKLKYPTTGTEALLMGILVEGTSKAAKFLRANGITLFKVRDET 163
+W +++IKSFAM ELEARKLKY TTGTEALLMG+L+E T+ AKFLRA+GIT+ KVRDET
Sbjct: 4 RWFSKAIKSFAMSELEARKLKYLTTGTEALLMGVLIESTNLTAKFLRAHGITILKVRDET 63
Query: 164 VELLGKSDMYFFSPEHPPLTEPARKALDWAIDEKLKSGGEGEINVAHLLLGIWSQKESAG 223
V+LLGK+D++FFSPEHPPLT+ A++ALDWA+D+K+K G GEI +H+LLGIWS+ +S G
Sbjct: 64 VKLLGKADLFFFSPEHPPLTDEAQRALDWAVDQKIKYGDGGEITTSHILLGIWSEVDSPG 123
Query: 224 QQILAGLGFNDEKAKELAKSV 244
+IL LGFNDEKAKEL S+
Sbjct: 124 HKILFTLGFNDEKAKELEPSI 144
>Glyma11g25870.1
Length = 108
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 43/52 (82%)
Query: 93 KPQPDAPEKVPKWSARSIKSFAMGELEARKLKYPTTGTEALLMGILVEGTSK 144
KP D PEK PKWSAR+IKS+AMGELEARKLK P TG EALL+G LVEG SK
Sbjct: 14 KPLSDTPEKTPKWSARAIKSYAMGELEARKLKNPNTGIEALLIGNLVEGFSK 65
>Glyma02g35060.1
Length = 167
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 100 EKVPKWSARSIKSFAMGELEARKLKYPTTGTEALLMGILVE---GTSKAAKFLRANGITL 156
K PKWSAR+IKS+A+GELEARKLKYP T T ALLMGILVE T+ + F N ++
Sbjct: 73 HKTPKWSARAIKSYAIGELEARKLKYPNTRTNALLMGILVEDFINTTTNSAFHDVNSKSV 132
Query: 157 FKVR 160
+ R
Sbjct: 133 VENR 136
>Glyma08g01140.1
Length = 919
Score = 58.9 bits (141), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 86 SFSLPTPKPQPDAPEKVPK-----WSARSIKSFAMGELEARKLKYPTTGTEALLMGILVE 140
+F L T + A VPK ++ ++IK + + EAR+L + GTE +L+G++ E
Sbjct: 67 TFPLTTTSRRERAKRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGE 126
Query: 141 GTSKAAKFLRANGITLFKVRDETVELLGKSDMYFFSPEHPPLTEPARKALDWAIDEKLKS 200
GT AAK L++ GI L R E +++G+ F P T A++ L+ +++E +
Sbjct: 127 GTGIAAKVLKSMGINLKDARVEVEKIIGRGSG--FVAVEIPFTSRAKRVLELSLEEARQL 184
Query: 201 G 201
G
Sbjct: 185 G 185
>Glyma05g38510.1
Length = 914
Score = 58.9 bits (141), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 7/116 (6%)
Query: 86 SFSLPTPKPQPDAPEKVPK-----WSARSIKSFAMGELEARKLKYPTTGTEALLMGILVE 140
+F L T + A VPK ++ ++IK + + EAR+L + GTE +L+G++ E
Sbjct: 67 TFPLNTTSRRERAKRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGE 126
Query: 141 GTSKAAKFLRANGITLFKVRDETVELLGKSDMYFFSPEHPPLTEPARKALDWAIDE 196
GT AAK L++ GI L R E +++G+ F P T A++ L+++++E
Sbjct: 127 GTGIAAKVLKSMGINLKDARVEVEKIIGRGSG--FVAVEIPFTPRAKRVLEFSLEE 180
>Glyma06g17360.1
Length = 922
Score = 58.9 bits (141), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 88 SLPTPKPQPDAPEKVPK-----WSARSIKSFAMGELEARKLKYPTTGTEALLMGILVEGT 142
S+ T Q A VPK ++ ++IK + + EAR+L + GTE +L+G++ EGT
Sbjct: 73 SIATSSRQARATRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGT 132
Query: 143 SKAAKFLRANGITLFKVRDETVELLGKSDMYFFSPEHPPLTEPARKALDWAIDEKLKSG 201
AAK L++ GI L R E +++G+ F P T A++ L+ +++E + G
Sbjct: 133 GIAAKVLKSMGINLKDARVEVEKIIGRGSG--FVAVEIPFTPRAKRVLELSLEEARQLG 189
>Glyma04g37740.2
Length = 706
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 87 FSLPTPKPQPDAPEKVPK-----WSARSIKSFAMGELEARKLKYPTTGTEALLMGILVEG 141
S+ T + A VPK ++ ++IK + + EAR+L + GTE +L+G++ EG
Sbjct: 72 VSIATSSRRARATRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEG 131
Query: 142 TSKAAKFLRANGITLFKVRDETVELLGKSDMYFFSPEHPPLTEPARKALDWAIDEKLKSG 201
T AAK L++ GI L R E +++G+ F P T A++ L+ +++E + G
Sbjct: 132 TGIAAKVLKSMGINLKDARVEVEKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLG 189
>Glyma04g37740.1
Length = 922
Score = 57.0 bits (136), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Query: 88 SLPTPKPQPDAPEKVPK-----WSARSIKSFAMGELEARKLKYPTTGTEALLMGILVEGT 142
S+ T + A VPK ++ ++IK + + EAR+L + GTE +L+G++ EGT
Sbjct: 73 SIATSSRRARATRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGT 132
Query: 143 SKAAKFLRANGITLFKVRDETVELLGKSDMYFFSPEHPPLTEPARKALDWAIDEKLKSG 201
AAK L++ GI L R E +++G+ F P T A++ L+ +++E + G
Sbjct: 133 GIAAKVLKSMGINLKDARVEVEKIIGRGSG--FVAVEIPFTPRAKRVLELSLEEARQLG 189