Miyakogusa Predicted Gene
- Lj2g3v0435510.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0435510.1 Non Chatacterized Hit- tr|B9SKW2|B9SKW2_RICCO
Transcriptional corepressor SEUSS, putative
OS=Ricinus,39.81,8e-17,seg,NULL; LIM_bind,NULL; coiled-coil,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,NODE_30231_length_1557_cov_207.021194.path1.1
(401 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma16g32250.1 397 e-110
Glyma09g26960.1 384 e-107
Glyma09g26970.1 221 1e-57
Glyma16g32260.1 196 5e-50
Glyma09g26990.1 189 5e-48
Glyma06g12720.1 148 1e-35
Glyma06g12720.2 148 1e-35
Glyma13g09170.1 147 1e-35
Glyma14g27380.1 147 2e-35
Glyma04g42070.1 147 3e-35
>Glyma16g32250.1
Length = 834
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/394 (57%), Positives = 238/394 (60%), Gaps = 12/394 (3%)
Query: 13 SSSSSGIFFQGDGQSQNAVXXXXXXXXXXXXXXIPGTGRSNLGLVSGDMSNAVLNSVTNS 72
SSS SGIFFQGDGQSQN V +PG GRSNLG VSG M+NAVLNSV NS
Sbjct: 1 SSSHSGIFFQGDGQSQNVVNSDLSSSFVNSSSTVPGAGRSNLGPVSGGMNNAVLNSVPNS 60
Query: 73 APSVGASSLVTDANSALSGGPNLQRSASFNTESYLRLPAXXXXXXXXXXXXXXXXVMDGS 132
APSVGASSLVTDANSALSGGP+LQRSAS NT+SYLRLPA VMDGS
Sbjct: 61 APSVGASSLVTDANSALSGGPHLQRSASVNTDSYLRLPASPMSFTSNNISISGSSVMDGS 120
Query: 133 -VVQQSSHPDXXXXXXXXXXXXXXXXXXXXXXXXXXXGQGPLPMGARVPGSFVQDPNNLS 191
VVQQSSH D G PL MGA+VPGSF+QDPNN+S
Sbjct: 121 SVVQQSSHQDQNVQQLQQNQQQPQGASSATSLPASQTGLSPLQMGAQVPGSFIQDPNNMS 180
Query: 192 QLQKKPRLDIKXX-XXXXXXXXXXXXXXDSMQFQGRNPXXXXXXXXXXXXXXXXXXXSMP 250
L KKPR+DIK DSMQFQGRNP SMP
Sbjct: 181 HLSKKPRMDIKQEDVMQQQVIQQILQRQDSMQFQGRNPQLQALLQQQQRLRQQQIFQSMP 240
Query: 251 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMQPLSGAKRPYDSGV---C 307
VMQP S KRPYDSGV C
Sbjct: 241 QLQRAHLQQQQQQQQQQQHQQQQMQLRQQLQQQ-------VMQPSSAGKRPYDSGVSGVC 293
Query: 308 ARRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAM 367
ARRLMQYLYHQRQRP+DNSIAYWRKFVAEYYSPRAKKRWCLSLY NVGHHALGVFPQAAM
Sbjct: 294 ARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYSNVGHHALGVFPQAAM 353
Query: 368 DAWHCDICGSKSGKGFEATSEVLPRLNEIKFGSG 401
DAW CD+CGSKSG+GFEAT EVLPRLNEIKFGSG
Sbjct: 354 DAWQCDMCGSKSGRGFEATYEVLPRLNEIKFGSG 387
>Glyma09g26960.1
Length = 804
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/393 (55%), Positives = 229/393 (58%), Gaps = 41/393 (10%)
Query: 13 SSSSSGIFFQGDGQSQNAVXXXXXXXXXXXXXXIPGTGRSNLGLVSGDMSNAVLNSVTNS 72
SSS SGIFFQGDGQSQN V +PG G SNLG VSGD++NAVLN+VTNS
Sbjct: 1 SSSHSGIFFQGDGQSQNIVNSHLSSSFVNSSSTVPGAGCSNLGPVSGDINNAVLNTVTNS 60
Query: 73 APSVGASSLVTDANSALSGGPNLQRSASFNTESYLRLPAXXXXXXXXXXXXXXXXVMDGS 132
APSVGASSLVTDANSALS GP+LQRSAS NT+SYLRLPA VMDGS
Sbjct: 61 APSVGASSLVTDANSALSSGPHLQRSASVNTDSYLRLPASPMSFTLNNISISGSSVMDGS 120
Query: 133 VVQQSSHPDXXXXXXXXXXXXXXXXXXXXXXXXXXXGQGPLPMGARVPGSFVQDPNNLSQ 192
VQ P L MGA+VP SF+QDPNN+S
Sbjct: 121 SVQNQQQPQGASSATSLPASQTRPSL--------------LQMGAQVPRSFIQDPNNMSH 166
Query: 193 LQKKPRLDIKXX-XXXXXXXXXXXXXXDSMQFQGRNPXXXXXXXXXXXXXXXXXXXSMPX 251
L KKPR+DIK DSMQFQGRNP SMP
Sbjct: 167 LSKKPRMDIKQEDIMQQQVIQQILQRQDSMQFQGRNPQLQAFLQQQQRLRQQQIFQSMPQ 226
Query: 252 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMQPLSGAKRPYDSGV---CA 308
VMQP S KRPYDSGV CA
Sbjct: 227 LQRAHLQQQRQQLQQQ-----------------------VMQPSSAGKRPYDSGVSGVCA 263
Query: 309 RRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMD 368
RRLMQYLYHQRQRP+DNSIAYW KFVAEYYSPRAKKRWCLSLY NVGHHALGVFPQAAMD
Sbjct: 264 RRLMQYLYHQRQRPNDNSIAYWIKFVAEYYSPRAKKRWCLSLYSNVGHHALGVFPQAAMD 323
Query: 369 AWHCDICGSKSGKGFEATSEVLPRLNEIKFGSG 401
AW CDICGSKSG+GFEAT EVLPRLNEIKFGSG
Sbjct: 324 AWQCDICGSKSGRGFEATYEVLPRLNEIKFGSG 356
>Glyma09g26970.1
Length = 852
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 98/111 (88%), Positives = 102/111 (91%), Gaps = 3/111 (2%)
Query: 294 PLSGAKRPYDS---GVCARRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSL 350
P S KRPY+S GVCARRLMQYLYHQRQRP+DNSIAYWRKFVAEYYS RAKKRWCLSL
Sbjct: 290 PSSAVKRPYESSVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSLRAKKRWCLSL 349
Query: 351 YDNVGHHALGVFPQAAMDAWHCDICGSKSGKGFEATSEVLPRLNEIKFGSG 401
Y NVGHHALGVFPQA+MDAWHCDICGSKSG+GFEAT EVLPRLNEIKFGSG
Sbjct: 350 YSNVGHHALGVFPQASMDAWHCDICGSKSGRGFEATYEVLPRLNEIKFGSG 400
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/229 (54%), Positives = 137/229 (59%), Gaps = 2/229 (0%)
Query: 1 MTSSRVAGGLTHSSSSSGIFFQGDGQSQNAVXXXXXXXXXXXXXXIPGTGRSNLGLVSGD 60
MT SRVAGGLT SSS+SGIF+QGDGQSQN V +PG GRSNLG VSGD
Sbjct: 1 MTPSRVAGGLTQSSSNSGIFYQGDGQSQNVVDSHLSSSFVNSSSTVPGAGRSNLGPVSGD 60
Query: 61 MSNAVLNSVTNSAPSVGASSLVTDANSALSGGPNLQRSASFNTESYLRLPAXXXXXXXXX 120
++NAVLN+V NSAPSVGASSLVTDANS+LSGGP+LQRS S NT+SYLRLPA
Sbjct: 61 INNAVLNTVANSAPSVGASSLVTDANSSLSGGPHLQRSTSVNTDSYLRLPASPMSFTSNN 120
Query: 121 XXXXXXXVMDG-SVVQQSSHPDXXXXXXXXXXXXXXXXXXXXXXXXXXXGQGPLPMGARV 179
VMDG SVVQQSSH D G L MGA+V
Sbjct: 121 ISISGSSVMDGSSVVQQSSHQDQNVQQLQQNKQQPQGASSATSLPASQTGPSTLQMGAQV 180
Query: 180 PGSFVQDPNNLSQLQKKPRLDIKXX-XXXXXXXXXXXXXXDSMQFQGRN 227
PGSF+QDPNN+S L KK RLD K DSMQFQGRN
Sbjct: 181 PGSFIQDPNNMSHLSKKNRLDTKQEDMTQQQVIQQLLQRQDSMQFQGRN 229
>Glyma16g32260.1
Length = 853
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 83/88 (94%), Positives = 86/88 (97%)
Query: 314 YLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWHCD 373
YLYHQRQRP+DNSIAYWRKFVAEYYSPRAKKRWCLSLY NVGHHALGVFPQA+MDAWHCD
Sbjct: 303 YLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYSNVGHHALGVFPQASMDAWHCD 362
Query: 374 ICGSKSGKGFEATSEVLPRLNEIKFGSG 401
ICGSKSG+GFEAT EVLPRLNEIKFGSG
Sbjct: 363 ICGSKSGRGFEATYEVLPRLNEIKFGSG 390
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/229 (53%), Positives = 134/229 (58%), Gaps = 2/229 (0%)
Query: 1 MTSSRVAGGLTHSSSSSGIFFQGDGQSQNAVXXXXXXXXXXXXXXIPGTGRSNLGLVSGD 60
MT RVAGGLT SSS+SGIF+QGDGQSQN V + G RSNLG VSGD
Sbjct: 1 MTPLRVAGGLTQSSSNSGIFYQGDGQSQNVVNSHLSSSFVNSSSTVSGASRSNLGPVSGD 60
Query: 61 MSNAVLNSVTNSAPSVGASSLVTDANSALSGGPNLQRSASFNTESYLRLPAX-XXXXXXX 119
M+NAVLNSV NSAPSVGASSLVTDANSALSGGP+LQRSAS NT+SYLRLPA
Sbjct: 61 MNNAVLNSVANSAPSVGASSLVTDANSALSGGPHLQRSASVNTDSYLRLPASPMSFTSNN 120
Query: 120 XXXXXXXXVMDGSVVQQSSHPDXXXXXXXXXXXXXXXXXXXXXXXXXXXGQGPLPMGARV 179
+ SVVQQSSH D G L MGA++
Sbjct: 121 ISISGSSVMDVSSVVQQSSHQDQNVQQLQQNQQQPQGASSAMSLSASQTGPSMLQMGAQI 180
Query: 180 PGSFVQDPNNLSQLQKKPRLDIKXX-XXXXXXXXXXXXXXDSMQFQGRN 227
PGSF+QDPNN+S L KKPR+DIK DSMQFQGRN
Sbjct: 181 PGSFIQDPNNMSHLSKKPRMDIKQEDMMQQQVIQQILQRQDSMQFQGRN 229
>Glyma09g26990.1
Length = 432
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 82/88 (93%), Positives = 84/88 (95%)
Query: 314 YLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVGHHALGVFPQAAMDAWHCD 373
YLYHQRQRP+DNSIAYWRKFVAEYYSPRAKKRWCLSLY NVGHHALGVFPQAAMDAW CD
Sbjct: 208 YLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYSNVGHHALGVFPQAAMDAWQCD 267
Query: 374 ICGSKSGKGFEATSEVLPRLNEIKFGSG 401
ICGSKSG+GFEAT EVLPRLNEIK GSG
Sbjct: 268 ICGSKSGRGFEATYEVLPRLNEIKLGSG 295
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 98/185 (52%), Gaps = 30/185 (16%)
Query: 46 IPGTGRSNLGLVSGDMSNAVLNSVTNSAPSVGASSLVTDANSALSGGPNLQRSASFNTES 105
+PG G SNLG VSGD++NAVLN+V NSAPSVGASSLVTDANSALSGGP+LQRSA
Sbjct: 16 VPGAGCSNLGPVSGDINNAVLNTVANSAPSVGASSLVTDANSALSGGPHLQRSA------ 69
Query: 106 YLRLPAXXXXXXXXXXXXXXXXVMDG-SVVQQSSHPDXXXXXXXXXXXXXXXXXXXXXXX 164
+MDG SVVQQSSH D
Sbjct: 70 ----------------------MMDGSSVVQQSSHQDQNVQQLQQNQQQLQGASSATSLP 107
Query: 165 XXXXGQGPLPMGARVPGSFVQDPNNLSQLQKKPRLDIKXX-XXXXXXXXXXXXXXDSMQF 223
G L MGA+VP SF+ DPNN+S L KKPR+DIK D MQF
Sbjct: 108 ASQTGPSLLQMGAQVPRSFILDPNNMSHLSKKPRMDIKQEDIMQQQVIQQILQRQDPMQF 167
Query: 224 QGRNP 228
QGRNP
Sbjct: 168 QGRNP 172
>Glyma06g12720.1
Length = 953
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Query: 296 SGAKRPYDSGVCARRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVG 355
S AK Y+ G+CARRL Y+Y Q+ RP DN+I +WRKFVAEY++P AKK+WC+S+Y + G
Sbjct: 366 SPAKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGS-G 424
Query: 356 HHALGVFPQAAMDAWHCDICGSKSGKGFEATSEVLPRLNEIKFGSG 401
GVFPQ D WHC+IC K G+GFEAT EVLPRL +IK+ SG
Sbjct: 425 RQTTGVFPQ---DVWHCEICNRKPGRGFEATVEVLPRLFKIKYESG 467
>Glyma06g12720.2
Length = 910
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Query: 296 SGAKRPYDSGVCARRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVG 355
S AK Y+ G+CARRL Y+Y Q+ RP DN+I +WRKFVAEY++P AKK+WC+S+Y + G
Sbjct: 323 SPAKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGS-G 381
Query: 356 HHALGVFPQAAMDAWHCDICGSKSGKGFEATSEVLPRLNEIKFGSG 401
GVFPQ D WHC+IC K G+GFEAT EVLPRL +IK+ SG
Sbjct: 382 RQTTGVFPQ---DVWHCEICNRKPGRGFEATVEVLPRLFKIKYESG 424
>Glyma13g09170.1
Length = 935
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Query: 296 SGAKRPYDSGVCARRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVG 355
S K Y+ G+CARRL Y+Y Q+ RP DN+I +WRKFV+EY++P AKK+WC+S+Y N G
Sbjct: 328 SPVKPAYEPGMCARRLTHYMYQQQHRPDDNNIEFWRKFVSEYFAPNAKKKWCVSMYGN-G 386
Query: 356 HHALGVFPQAAMDAWHCDICGSKSGKGFEATSEVLPRLNEIKFGSG 401
GVFPQ D WHC+IC K G+GFEAT+EVLPRL +IK+ SG
Sbjct: 387 RQTTGVFPQ---DVWHCEICNRKPGRGFEATAEVLPRLFKIKYESG 429
>Glyma14g27380.1
Length = 915
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Query: 296 SGAKRPYDSGVCARRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVG 355
S K Y+ G+CARRL Y+Y Q+ RP DN+I +WRKFVAEY++P AKK+WC+S+Y + G
Sbjct: 325 SPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGS-G 383
Query: 356 HHALGVFPQAAMDAWHCDICGSKSGKGFEATSEVLPRLNEIKFGSG 401
GVFPQ D WHC+IC K G+GFEAT+EVLPRL +IK+ SG
Sbjct: 384 RQTTGVFPQ---DVWHCEICNCKPGRGFEATAEVLPRLFKIKYESG 426
>Glyma04g42070.1
Length = 911
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 78/106 (73%), Gaps = 4/106 (3%)
Query: 296 SGAKRPYDSGVCARRLMQYLYHQRQRPSDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVG 355
S K Y+ G+CARRL Y+Y Q+ RP DN+I +WRKFVAEY++P AKK+WC+S+Y + G
Sbjct: 324 SPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVAEYFAPNAKKKWCVSMYGS-G 382
Query: 356 HHALGVFPQAAMDAWHCDICGSKSGKGFEATSEVLPRLNEIKFGSG 401
GVFPQ D WHC+IC K G+GFEAT EVLPRL +IK+ SG
Sbjct: 383 RQTTGVFPQ---DVWHCEICNRKPGRGFEATVEVLPRLFKIKYESG 425