Miyakogusa Predicted Gene

Lj2g3v0392950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0392950.1 tr|G7I7Z0|G7I7Z0_MEDTR Cleavage and
polyadenylation specificity factor subunit OS=Medicago
truncatul,90.22,0,Metallo-hydrolase/oxidoreductase,NULL; no
description,NULL; CLEAVAGE AND POLYADENYLATION
SPECIFICITY,CUFF.34553.1
         (329 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g20140.1                                                       122   7e-28
Glyma12g29040.1                                                       119   4e-27
Glyma02g09380.1                                                       117   1e-26

>Glyma08g20140.1 
          Length = 688

 Score =  122 bits (305), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 162/339 (47%), Gaps = 45/339 (13%)

Query: 7   VKPLCGVYNENPLSYL-VSIDGFNFLIDCG------------WNDHFDPSLLQPLSRVAS 53
           V PL G  NE   S + +S  G + L DCG            + D  DPS          
Sbjct: 22  VTPL-GAGNEVGRSCVYMSYKGKSILFDCGIHLGFSGMSALPYFDEIDPS---------- 70

Query: 54  TIDAVLLSHPDTLHLGALPYAMKQLGLSAPVF---STEPVYRLGLLTMYDQFLSRKQVSE 110
           T+D +L++H    H  +LPY +++      VF   +T+ +Y+L    +   F+   +VS 
Sbjct: 71  TLDVLLITHFHLDHAASLPYFLEKTTFRGRVFMTYATKAIYKL----LLSDFVKVSKVSV 126

Query: 111 FD-LFTLDDIDSAFQSVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDV 169
            D LF   DI+ +   +  + + Q   ++G    I    + AGH+LG  ++ +   G  V
Sbjct: 127 EDMLFDEQDINRSMDKIEVIDFHQTVEVNG----IRFWCYAAGHVLGAAMFMVDIAGVRV 182

Query: 170 IYAVDFNHRKERHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQKDKEFGDILKKTLRSG 229
           +Y  D++  ++RHL    +  F     +I   Y   ++QP R  ++K F D++  T+  G
Sbjct: 183 LYTGDYSREEDRHLRAAEIPQFSPDVCIIESTYGVQHHQP-RHTREKRFTDVIHSTISQG 241

Query: 230 GNVLLPIDTAGRVLELILMLESYWAEENLVY--PIYFLSYVSSSTIDYVKSFLEWMSDTI 287
           G VL+P    GR  EL+L+L+ YWA    ++  PIY+ S ++   +   +++   M+D +
Sbjct: 242 GRVLIPAYALGRAQELLLILDEYWANHPELHNIPIYYASPLAKKCLTVYETYTLSMNDRV 301

Query: 288 AKSFEQTRENIFLLKYITLLVNKTELDNVPDGPKVVLAS 326
               +  + N F  K+I+ L +     +V  GP VV+AS
Sbjct: 302 ----QNAKSNPFSFKHISALSSIEVFKDV--GPSVVMAS 334


>Glyma12g29040.1 
          Length = 689

 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 159/339 (46%), Gaps = 45/339 (13%)

Query: 7   VKPLCGVYNENPLSYL-VSIDGFNFLIDCG------------WNDHFDPSLLQPLSRVAS 53
           V PL G  NE   S + +S  G   L DCG            + D  DPS          
Sbjct: 23  VTPL-GAGNEVGRSCVYMSYKGKTVLFDCGIHPAYSGMAALPYFDEIDPS---------- 71

Query: 54  TIDAVLLSHPDTLHLGALPYAMKQLGLSAPVF---STEPVYRLGLLTMYDQFLSRKQVSE 110
           T+D +L++H    H  +LPY +++      VF   +T+ +Y+L    +   F+   +VS 
Sbjct: 72  TVDVLLITHFHLDHAASLPYFLEKTTFRGRVFMTYATKAIYKL----LLSDFVKVSKVSV 127

Query: 111 FD-LFTLDDIDSAFQSVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDV 169
            D LF   DI+ +   +  + + Q   ++G    I    + AGH+LG  ++ +   G  V
Sbjct: 128 EDMLFDEQDINRSMDKIEVIDFHQTVEVNG----IRFWCYTAGHVLGAAMFMVDIAGVRV 183

Query: 170 IYAVDFNHRKERHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQKDKEFGDILKKTLRSG 229
           +Y  D++  ++RHL       F     +I   Y   ++QP R  ++K F D++  T+  G
Sbjct: 184 LYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQP-RHTREKRFTDVIHSTISQG 242

Query: 230 GNVLLPIDTAGRVLELILMLESYWAE--ENLVYPIYFLSYVSSSTIDYVKSFLEWMSDTI 287
           G VL+P    GR  EL+L+L+ YWA   E    PIY+ S ++   +   +++   M+D I
Sbjct: 243 GRVLIPAFALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRI 302

Query: 288 AKSFEQTRENIFLLKYITLLVNKTELDNVPDGPKVVLAS 326
               +  + N F  K+++ L +     +V  GP VV+AS
Sbjct: 303 ----QNAKSNPFSFKHVSALSSIEVFKDV--GPSVVMAS 335


>Glyma02g09380.1 
          Length = 532

 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 149/313 (47%), Gaps = 17/313 (5%)

Query: 22  LVSIDGFNFLIDCGWN----DHF---DPSLLQPLSRVASTIDAVLLSHPDTLHLGALPYA 74
           +V+I+    + DCG +    DH    D + + P   + S +  ++++H    H+GAL Y 
Sbjct: 20  VVTINAKRIMFDCGMHMGYLDHRRYPDFTRISPSRDLNSALSCIIITHFHLDHVGALAYF 79

Query: 75  MKQLGLSAPVFSTEPVYRLGLLTMYD-QFLSRKQVSEFDLFTLDDIDSAFQSVTRLTYSQ 133
            + LG + PV+ T P   L  L + D + +   +  E +LF+ D I    + V  +   Q
Sbjct: 80  TEVLGYNGPVYMTYPTKALAPLMLEDYRKVMVDRRGEEELFSSDQIAECMKKVIAVDLRQ 139

Query: 134 NHHLSGKGEGIVIAPHVAGHLLGGTIWKITKDGEDVIYAVDFNHRKERHLNGTVLGSFVR 193
              +    + + I  + AGH++G  ++       +++Y  D+N   +RHL    +   +R
Sbjct: 140 TVQVE---KDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNMTPDRHLGAAQIDR-LR 195

Query: 194 PAVLITDAYNALNNQPYRRQKDKEFGDILKKTLRSGGNVLLPIDTAGRVLELILMLESYW 253
             +LIT++  A   +  R  +++EF   + K +  GG VL+P    GR  EL ++LE YW
Sbjct: 196 LDLLITESTYATTIRDSRYAREREFLKAVHKCVSCGGKVLIPTFALGRAQELCILLEDYW 255

Query: 254 AEENLVYPIYFLSYVSSSTIDYVKSFLEWMSDTIAKSFEQTRENIFLLKYITLLVNKTEL 313
              NL  PIYF + ++     Y K  + W    I  ++  ++ N F  K +     +  +
Sbjct: 256 ERMNLKVPIYFSAGLTIQANAYYKMLIRWTRQKIKDTY--SKHNAFDFKNVQKF--ERSM 311

Query: 314 DNVPDGPKVVLAS 326
            + P GP V+ A+
Sbjct: 312 IDAP-GPCVLFAT 323