Miyakogusa Predicted Gene

Lj2g3v0371730.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0371730.1 tr|I0Z3C5|I0Z3C5_9CHLO 60S ribosomal protein L36
OS=Coccomyxa subellipsoidea C-169 PE=3
SV=1,74.63,2e-19,RIBOSOMAL_L36E,Ribosomal protein L36e; 60S RIBOSOMAL
PROTEIN L36,Ribosomal protein L36e; Ribosomal_L,CUFF.34543.1
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g06460.1                                                       138   1e-33
Glyma10g37840.1                                                       130   2e-31
Glyma19g06460.2                                                       130   3e-31
Glyma20g29980.1                                                       129   7e-31
Glyma20g29990.3                                                       128   1e-30
Glyma20g29990.2                                                       128   1e-30
Glyma20g29990.1                                                       128   1e-30

>Glyma19g06460.1 
          Length = 115

 Score =  138 bits (348), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/82 (86%), Positives = 76/82 (92%), Gaps = 4/82 (4%)

Query: 13  KQKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREE 72
           K KTSKRVHFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREE
Sbjct: 33  KGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREE 92

Query: 73  MSNVLRKMRLVFT----LCVPF 90
           MSNVLRKMRL++     LCVP+
Sbjct: 93  MSNVLRKMRLLYVLFSILCVPY 114


>Glyma10g37840.1 
          Length = 110

 Score =  130 bits (328), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 66/69 (95%), Positives = 68/69 (98%)

Query: 13  KQKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREE 72
           K KTSKRVHFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREE
Sbjct: 33  KGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREE 92

Query: 73  MSNVLRKMR 81
           MSNVLRKMR
Sbjct: 93  MSNVLRKMR 101


>Glyma19g06460.2 
          Length = 110

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 66/69 (95%), Positives = 68/69 (98%)

Query: 13  KQKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREE 72
           K KTSKRVHFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREE
Sbjct: 33  KGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREE 92

Query: 73  MSNVLRKMR 81
           MSNVLRKMR
Sbjct: 93  MSNVLRKMR 101


>Glyma20g29980.1 
          Length = 136

 Score =  129 bits (324), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 68/69 (98%)

Query: 13  KQKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREE 72
           K KTSKRVHFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREE
Sbjct: 59  KGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREE 118

Query: 73  MSNVLRKMR 81
           MS+VLRKMR
Sbjct: 119 MSSVLRKMR 127


>Glyma20g29990.3 
          Length = 110

 Score =  128 bits (321), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 68/69 (98%)

Query: 13  KQKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREE 72
           K KTSKRVHFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREE
Sbjct: 33  KGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREE 92

Query: 73  MSNVLRKMR 81
           MS+VLRKMR
Sbjct: 93  MSSVLRKMR 101


>Glyma20g29990.2 
          Length = 110

 Score =  128 bits (321), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 68/69 (98%)

Query: 13  KQKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREE 72
           K KTSKRVHFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREE
Sbjct: 33  KGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREE 92

Query: 73  MSNVLRKMR 81
           MS+VLRKMR
Sbjct: 93  MSSVLRKMR 101


>Glyma20g29990.1 
          Length = 110

 Score =  128 bits (321), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 68/69 (98%)

Query: 13  KQKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREE 72
           K KTSKRVHFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREE
Sbjct: 33  KGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREE 92

Query: 73  MSNVLRKMR 81
           MS+VLRKMR
Sbjct: 93  MSSVLRKMR 101