Miyakogusa Predicted Gene

Lj2g3v0343920.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0343920.1 tr|A9S3M4|A9S3M4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_162641,38.97,7e-19, ,CUFF.34508.1
         (145 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g02250.5                                                       178   1e-45
Glyma20g02250.4                                                       178   1e-45
Glyma20g02250.3                                                       178   1e-45
Glyma20g02250.2                                                       178   1e-45
Glyma20g02250.1                                                       178   1e-45

>Glyma20g02250.5 
          Length = 141

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 100/143 (69%), Gaps = 3/143 (2%)

Query: 1   MADTTQGSSSFWDGYKEFWSQRFAFLGNYSKFVKREKPVRSWSSSDVEEFIAYDPVHGPV 60
           MAD TQ   S+W+GYK FWS+RF+FL NYS+F+ R+KP+ SWSSSDVEEFIA DPVHGPV
Sbjct: 1   MADNTQ---SYWEGYKAFWSERFSFLSNYSRFINRDKPIPSWSSSDVEEFIASDPVHGPV 57

Query: 61  LKTAREAVQYXXXXXXXXXXXXXXXXXKYSKXXXXXXXXXXXXXIFGWTFGHEVANHALQ 120
           LK+AREAVQ+                 KYSK             IFGWTFGHE+ANH LQ
Sbjct: 58  LKSAREAVQFGLTGSALGALFTAGYAWKYSKSLHGAGLSFLAGGIFGWTFGHEIANHTLQ 117

Query: 121 LYRVDTLAAEAKFLDWWKFKTEG 143
           LYRVDTLAAEAKFLDWW  KT G
Sbjct: 118 LYRVDTLAAEAKFLDWWNKKTGG 140


>Glyma20g02250.4 
          Length = 141

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 100/143 (69%), Gaps = 3/143 (2%)

Query: 1   MADTTQGSSSFWDGYKEFWSQRFAFLGNYSKFVKREKPVRSWSSSDVEEFIAYDPVHGPV 60
           MAD TQ   S+W+GYK FWS+RF+FL NYS+F+ R+KP+ SWSSSDVEEFIA DPVHGPV
Sbjct: 1   MADNTQ---SYWEGYKAFWSERFSFLSNYSRFINRDKPIPSWSSSDVEEFIASDPVHGPV 57

Query: 61  LKTAREAVQYXXXXXXXXXXXXXXXXXKYSKXXXXXXXXXXXXXIFGWTFGHEVANHALQ 120
           LK+AREAVQ+                 KYSK             IFGWTFGHE+ANH LQ
Sbjct: 58  LKSAREAVQFGLTGSALGALFTAGYAWKYSKSLHGAGLSFLAGGIFGWTFGHEIANHTLQ 117

Query: 121 LYRVDTLAAEAKFLDWWKFKTEG 143
           LYRVDTLAAEAKFLDWW  KT G
Sbjct: 118 LYRVDTLAAEAKFLDWWNKKTGG 140


>Glyma20g02250.3 
          Length = 141

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 100/143 (69%), Gaps = 3/143 (2%)

Query: 1   MADTTQGSSSFWDGYKEFWSQRFAFLGNYSKFVKREKPVRSWSSSDVEEFIAYDPVHGPV 60
           MAD TQ   S+W+GYK FWS+RF+FL NYS+F+ R+KP+ SWSSSDVEEFIA DPVHGPV
Sbjct: 1   MADNTQ---SYWEGYKAFWSERFSFLSNYSRFINRDKPIPSWSSSDVEEFIASDPVHGPV 57

Query: 61  LKTAREAVQYXXXXXXXXXXXXXXXXXKYSKXXXXXXXXXXXXXIFGWTFGHEVANHALQ 120
           LK+AREAVQ+                 KYSK             IFGWTFGHE+ANH LQ
Sbjct: 58  LKSAREAVQFGLTGSALGALFTAGYAWKYSKSLHGAGLSFLAGGIFGWTFGHEIANHTLQ 117

Query: 121 LYRVDTLAAEAKFLDWWKFKTEG 143
           LYRVDTLAAEAKFLDWW  KT G
Sbjct: 118 LYRVDTLAAEAKFLDWWNKKTGG 140


>Glyma20g02250.2 
          Length = 141

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 100/143 (69%), Gaps = 3/143 (2%)

Query: 1   MADTTQGSSSFWDGYKEFWSQRFAFLGNYSKFVKREKPVRSWSSSDVEEFIAYDPVHGPV 60
           MAD TQ   S+W+GYK FWS+RF+FL NYS+F+ R+KP+ SWSSSDVEEFIA DPVHGPV
Sbjct: 1   MADNTQ---SYWEGYKAFWSERFSFLSNYSRFINRDKPIPSWSSSDVEEFIASDPVHGPV 57

Query: 61  LKTAREAVQYXXXXXXXXXXXXXXXXXKYSKXXXXXXXXXXXXXIFGWTFGHEVANHALQ 120
           LK+AREAVQ+                 KYSK             IFGWTFGHE+ANH LQ
Sbjct: 58  LKSAREAVQFGLTGSALGALFTAGYAWKYSKSLHGAGLSFLAGGIFGWTFGHEIANHTLQ 117

Query: 121 LYRVDTLAAEAKFLDWWKFKTEG 143
           LYRVDTLAAEAKFLDWW  KT G
Sbjct: 118 LYRVDTLAAEAKFLDWWNKKTGG 140


>Glyma20g02250.1 
          Length = 141

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 100/143 (69%), Gaps = 3/143 (2%)

Query: 1   MADTTQGSSSFWDGYKEFWSQRFAFLGNYSKFVKREKPVRSWSSSDVEEFIAYDPVHGPV 60
           MAD TQ   S+W+GYK FWS+RF+FL NYS+F+ R+KP+ SWSSSDVEEFIA DPVHGPV
Sbjct: 1   MADNTQ---SYWEGYKAFWSERFSFLSNYSRFINRDKPIPSWSSSDVEEFIASDPVHGPV 57

Query: 61  LKTAREAVQYXXXXXXXXXXXXXXXXXKYSKXXXXXXXXXXXXXIFGWTFGHEVANHALQ 120
           LK+AREAVQ+                 KYSK             IFGWTFGHE+ANH LQ
Sbjct: 58  LKSAREAVQFGLTGSALGALFTAGYAWKYSKSLHGAGLSFLAGGIFGWTFGHEIANHTLQ 117

Query: 121 LYRVDTLAAEAKFLDWWKFKTEG 143
           LYRVDTLAAEAKFLDWW  KT G
Sbjct: 118 LYRVDTLAAEAKFLDWWNKKTGG 140