Miyakogusa Predicted Gene
- Lj2g3v0308710.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0308710.3 Non Chatacterized Hit- tr|C5WUG2|C5WUG2_SORBI
Putative uncharacterized protein Sb01g030700
OS=Sorghu,50.54,5e-19,seg,NULL; DUF3464,Protein of unknown function
DUF3464,CUFF.34511.3
(182 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma16g29640.1 166 1e-41
Glyma01g35170.1 63 2e-10
Glyma09g34590.1 62 2e-10
>Glyma16g29640.1
Length = 183
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 122/183 (66%), Gaps = 6/183 (3%)
Query: 1 MKSLVCASHPTLYLPNYSSWKPKFRAFHPITAEKQPNYYPLTTPKPPRANAKGFSNR-PS 59
MK+L+CA + L S WKP F+A+H K YP TT KP RA+AKGFS+ P
Sbjct: 1 MKTLICAPNAAFNLSKLSPWKPNFQAYHHHPTHKL--NYPFTTLKP-RASAKGFSSTGPP 57
Query: 60 TTETDIVPSKNR--RRGVNEEEDEELPRVVLYRIIGRILFSXXXXXXXXXXXXXXXXXXK 117
T +D + + RR N+++D+ELP+ V+YR+IGRILFS K
Sbjct: 58 TVASDNANTTKKPMRRKNNDDDDDELPQEVMYRLIGRILFSVGVPMGLGLALLGLFGELK 117
Query: 118 DRGIWDAPLWIPFTTTLLTFGASTLGIAYGTLSASLDAEREGTFLGLNEVQRNWVEMWEE 177
++ +WDAPLW+PF TTLLTFGAS+LGIAYG LS SLDAE+EG+FLG+ ++Q+NWVEMW+E
Sbjct: 118 EKHVWDAPLWLPFLTTLLTFGASSLGIAYGALSTSLDAEKEGSFLGVEQLQKNWVEMWQE 177
Query: 178 EDK 180
+ +
Sbjct: 178 KQE 180
>Glyma01g35170.1
Length = 208
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 123 DAPLWIPFTTTLLTFGASTLGIAYGTLSASLDAEREGTFLGLNEVQRNWVEMWEE 177
D P W+PF + FG++ LG++YG +S+S D REG+F G E Q+NW W+
Sbjct: 145 DVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSFWGWTEAQKNWPVFWQS 199
>Glyma09g34590.1
Length = 287
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 123 DAPLWIPFTTTLLTFGASTLGIAYGTLSASLDAEREGTFLGLNEVQRNWVEMWEE 177
D P W+PF + FG++ LG++YG +S+S D REG+F G E Q+NW W+
Sbjct: 223 DVPTWVPFIVSFFFFGSALLGVSYGIVSSSWDPLREGSFWGWTEAQKNWPVFWQS 277