Miyakogusa Predicted Gene

Lj2g3v0286930.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0286930.1 tr|B9ID70|B9ID70_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_808241 PE=4
SV=1,48.05,0.00000000003, ,CUFF.34496.1
         (108 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g31860.1                                                       129   6e-31

>Glyma16g31860.1 
          Length = 583

 Score =  129 bits (325), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 76/109 (69%), Positives = 89/109 (81%), Gaps = 9/109 (8%)

Query: 1   MAEPDLDTADFY-LSHDLEHCELSVQNISNKSSNEAVSSINKSEIIDLLSPSPPKAKQSS 59
           MAE DL+T D   LSHD+EH  L +QN    +S+E VSSI+K+EIIDLLSPSPPK  +S+
Sbjct: 483 MAEADLNTTDLLPLSHDIEHTGL-IQN----TSSEVVSSIDKNEIIDLLSPSPPK--KSN 535

Query: 60  LTSLKCEQSSDKRMEVINLSDSENDMSPEHKEKAKELRLFLASIRNEIH 108
           L S KC+QSSD+ +EVINLSDSENDMS E K+KAKELRLFLASIRNEIH
Sbjct: 536 LFS-KCQQSSDQHIEVINLSDSENDMSVERKQKAKELRLFLASIRNEIH 583