Miyakogusa Predicted Gene

Lj2g3v0276760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0276760.1 CUFF.34447.1
         (406 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g31910.1                                                       199   4e-51
Glyma10g38180.1                                                        73   6e-13

>Glyma16g31910.1 
          Length = 239

 Score =  199 bits (507), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/230 (55%), Positives = 147/230 (63%), Gaps = 39/230 (16%)

Query: 200 QECLSILSVPENGDKVDAKLGSNPDFPLKEILSDPCIAFAIQTLTGTTCEAFKDPLISSE 259
           +EC+ ++   ENGDKVDAKL    DFPL+E+L+DPCIAFAIQTLTG T EA KD    SE
Sbjct: 6   EECVRVI---ENGDKVDAKLDYTLDFPLRELLTDPCIAFAIQTLTGVTFEASKDLQTFSE 62

Query: 260 LKKSQHSETSGASA---ERHGKKINVPGEVSPKLPSPEGFAVTQEHAGVAKNDHKTK-EN 315
           LK SQHS+TS ++A   E  GKK N  G    +  SPE  ++  EHAG AK D K K EN
Sbjct: 63  LKNSQHSKTSASAAAIGEGDGKKSN-DGLGGNEFSSPENLSIPPEHAGDAKTDLKAKNEN 121

Query: 316 AGSACEKTLD-TSLMDPCIEFAIKTLTATIPVD-CDQNPKN------------YIQQQLS 361
           AG + EKTLD +S MDPCIEFAIKTLT TIP D  DQNPKN            + +  LS
Sbjct: 122 AGPSSEKTLDMSSWMDPCIEFAIKTLTGTIPSDSADQNPKNCLQQQLSSSNSQHSEMALS 181

Query: 362 SS----------------NTQKPKF-KQSFVDPTLQHTRNIVIGNSAGAR 394
           S                 +TQKP F KQSFVDP+LQHTRNI IGNSAG+R
Sbjct: 182 SVSLDNIYKTDYSCSQYFDTQKPMFNKQSFVDPSLQHTRNIGIGNSAGSR 231


>Glyma10g38180.1 
          Length = 176

 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 76/161 (47%), Gaps = 19/161 (11%)

Query: 210 ENGDKVDAKLGSNPDFPLKEILSDPCIAFAIQTLTGTTCEAFKDPLISSELKKSQHSETS 269
           ENG+KVD     + DFP+ EIL DPCIAFA+Q LTG T E +         KKSQ    S
Sbjct: 23  ENGEKVDGMSDYSRDFPIAEILKDPCIAFAVQVLTGDTFETY--------YKKSQMPSES 74

Query: 270 GASAERHGKKINVPGEVSPKLPSPEGFAVTQEHAGVAKNDH--KTKENAGSACEKTLDTS 327
            A+ E          E    L  PE   + +E     +  H  +  EN G++ E  L+ S
Sbjct: 75  LAAVEGQNIIDVEQEECKTVLSPPEKLIIPKECVAADEIGHTDQGNENLGTSSEMPLEIS 134

Query: 328 LMDPCIEFAIKTLTA--TIPVDCDQNPKNYIQQQLSSSNTQ 366
            MD  +E+A     +   IP+D D        ++L S+ TQ
Sbjct: 135 RMDSLLEYAKSLFDSGNAIPLDTD-------SKELPSATTQ 168