Miyakogusa Predicted Gene

Lj2g3v0253500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0253500.1 tr|A9SNE2|A9SNE2_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,31.38,3e-17,seg,NULL,gene.g38710.t1.1
         (226 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g41310.1                                                       181   8e-46
Glyma18g44490.1                                                       116   2e-26

>Glyma09g41310.1 
          Length = 109

 Score =  181 bits (458), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 89/108 (82%), Positives = 98/108 (90%)

Query: 108 IALFVGLGSSFFKHPGYVMDGVVAIGALLMESFLERKGGGLLVVVSLWRVIRVAESVFEL 167
           +AL VGLGSSFFKH GYV+DGVVAIGA+ +E+F+ RKGGGLLVVVSLWRVIRV ESVFEL
Sbjct: 1   MALLVGLGSSFFKHVGYVIDGVVAIGAIFLEAFVVRKGGGLLVVVSLWRVIRVVESVFEL 60

Query: 168 SDEAIEAQIAGIVCQFEELKEENMRLLETIHEKDKIIEMLTVDLDKCR 215
           SDEAIEAQIAGIVCQFE LKEENMRL+  I+EKDK+IEML  DLDKCR
Sbjct: 61  SDEAIEAQIAGIVCQFEALKEENMRLVGVIYEKDKMIEMLKEDLDKCR 108


>Glyma18g44490.1 
          Length = 91

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/109 (59%), Positives = 74/109 (67%), Gaps = 18/109 (16%)

Query: 108 IALFVGLGSSFFKHPGYVMDGVVAIGALLMESFLERKGGGLLVVVSLWRVIRVAESVFEL 167
           +AL VG+GSSFFKH GYV+DGV+         F E +G         W V  V E VFEL
Sbjct: 1   MALLVGIGSSFFKHVGYVIDGVL---------FGEERG---------WFVGCVVECVFEL 42

Query: 168 SDEAIEAQIAGIVCQFEELKEENMRLLETIHEKDKIIEMLTVDLDKCRS 216
           SDEAIEAQIA I+CQFE LKEENMRLL  ++EKD +IEML  DLDKCR 
Sbjct: 43  SDEAIEAQIARIICQFEALKEENMRLLGVLYEKDNMIEMLKEDLDKCRD 91