Miyakogusa Predicted Gene

Lj2g3v0227090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0227090.1 tr|C1DYP2|C1DYP2_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_55874
,49.07,5e-19,Pam16,Protein Transporter, Pam16; MITOCHONDRIA ASSOCIATED
GRANULOCYTE MACROPHAGE CSF SIGNALING MOLEC,CUFF.34392.1
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g27940.1                                                       209   5e-55
Glyma16g27940.2                                                       190   3e-49
Glyma02g08820.1                                                       157   3e-39
Glyma06g20480.1                                                       144   2e-35
Glyma04g34000.1                                                        89   8e-19

>Glyma16g27940.1 
          Length = 116

 Score =  209 bits (532), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 101/116 (87%), Positives = 108/116 (93%), Gaps = 1/116 (0%)

Query: 1   MASKILANLIVMGGGILVRAVAQAYRQALNNAAKNGVAQETIQNTVRRVSKVMTEQEARQ 60
           MA+KILANLIVMGGGIL RAV QAYRQAL NA+KNGVAQETIQNT+RR SKVMTEQEAR+
Sbjct: 1   MAAKILANLIVMGGGILARAVVQAYRQALTNASKNGVAQETIQNTIRRASKVMTEQEARR 60

Query: 61  ILGVAEETPWEEILKKYDRLFENNSKNGSFYLQSKVHRAKECLEAV-HGKSEGTPS 115
           ILGV EETPWEEI+KKYD LFENN+KNGSFYLQSKVHRAKECLEAV  GKS+GTPS
Sbjct: 61  ILGVTEETPWEEIIKKYDNLFENNAKNGSFYLQSKVHRAKECLEAVQQGKSQGTPS 116


>Glyma16g27940.2 
          Length = 105

 Score =  190 bits (483), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 91/105 (86%), Positives = 97/105 (92%), Gaps = 1/105 (0%)

Query: 12  MGGGILVRAVAQAYRQALNNAAKNGVAQETIQNTVRRVSKVMTEQEARQILGVAEETPWE 71
           MGGGIL RAV QAYRQAL NA+KNGVAQETIQNT+RR SKVMTEQEAR+ILGV EETPWE
Sbjct: 1   MGGGILARAVVQAYRQALTNASKNGVAQETIQNTIRRASKVMTEQEARRILGVTEETPWE 60

Query: 72  EILKKYDRLFENNSKNGSFYLQSKVHRAKECLEAV-HGKSEGTPS 115
           EI+KKYD LFENN+KNGSFYLQSKVHRAKECLEAV  GKS+GTPS
Sbjct: 61  EIIKKYDNLFENNAKNGSFYLQSKVHRAKECLEAVQQGKSQGTPS 105


>Glyma02g08820.1 
          Length = 88

 Score =  157 bits (396), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 75/85 (88%), Positives = 80/85 (94%), Gaps = 1/85 (1%)

Query: 32  AAKNGVAQETIQNTVRRVSKVMTEQEARQILGVAEETPWEEILKKYDRLFENNSKNGSFY 91
           A+KNGVAQETIQNT+RR SKVMTEQEARQILGV EETPWEEI+KKYD LFENN+KNGSFY
Sbjct: 4   ASKNGVAQETIQNTMRRASKVMTEQEARQILGVTEETPWEEIIKKYDNLFENNAKNGSFY 63

Query: 92  LQSKVHRAKECLEAV-HGKSEGTPS 115
           LQSKVHRAKECLEAV  GKS+GTPS
Sbjct: 64  LQSKVHRAKECLEAVQQGKSQGTPS 88


>Glyma06g20480.1 
          Length = 88

 Score =  144 bits (364), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 69/87 (79%), Positives = 78/87 (89%), Gaps = 1/87 (1%)

Query: 29  LNNAAKNGVAQETIQNTVRRVSKVMTEQEARQILGVAEETPWEEILKKYDRLFENNSKNG 88
           + +A++NGVAQETIQNT+RR SK MT+QEARQILGV EET WEEI+KKY  LFENN+KNG
Sbjct: 1   IPDASRNGVAQETIQNTIRRASKGMTQQEARQILGVTEETSWEEIVKKYGSLFENNTKNG 60

Query: 89  SFYLQSKVHRAKECLEAVH-GKSEGTP 114
           SFYLQSKVHRAKECLEAVH GK+ GTP
Sbjct: 61  SFYLQSKVHRAKECLEAVHQGKNPGTP 87


>Glyma04g34000.1 
          Length = 56

 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 47/55 (85%), Gaps = 1/55 (1%)

Query: 61  ILGVAEETPWEEILKKYDRLFENNSKNGSFYLQSKVHRAKECLEAVH-GKSEGTP 114
           IL V EET  EEI+KKY  LFENN+KNGSFYLQSKVHRAKECLEAVH GK+ GTP
Sbjct: 1   ILSVTEETSREEIVKKYGSLFENNAKNGSFYLQSKVHRAKECLEAVHQGKNPGTP 55