Miyakogusa Predicted Gene

Lj2g3v0167090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0167090.1 Non Chatacterized Hit- tr|K3YW91|K3YW91_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si018537,60.32,3e-17,seg,NULL,gene.g38556.t1.1
         (292 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g05460.3                                                       216   3e-56
Glyma19g05460.1                                                       215   3e-56
Glyma19g05460.2                                                       215   4e-56
Glyma13g07400.1                                                       211   1e-54
Glyma13g07400.2                                                       211   1e-54
Glyma19g05820.1                                                        66   4e-11

>Glyma19g05460.3 
          Length = 282

 Score =  216 bits (549), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/251 (49%), Positives = 145/251 (57%), Gaps = 23/251 (9%)

Query: 1   MASRSDVVSHYKRKFYQRHVDPDLVVEPMNFGXXXXXXXXXXXXXXXXXXXXNDQ--VXX 58
           MASR DVVSH+KRKFYQR+VDPDLVVEPM+ G                    N+Q     
Sbjct: 37  MASRDDVVSHFKRKFYQRYVDPDLVVEPMSVGGSSSQPTRSSTTSSSSSPPTNNQPRARS 96

Query: 59  XXXXXXXXXXXXXXXXXPNSTPLRWDRQTILFSVNAWXXXXXXXXXXXXXXRHLSQRAYR 118
                            P+ TPLRWDRQT+LFSV AW              +HLS RAYR
Sbjct: 97  SGSTNRTSGTSTTAGPGPSPTPLRWDRQTVLFSVYAWVFVVAFLAAIPLVPKHLSHRAYR 156

Query: 119 LSFMGTTCSSLYSLYSQYGIMFDEVNLLKLTSNFDEV---KLFLRGKWDRKLPKVISNIS 175
           L F+GT CSSLYSLYSQYG      NL  L   F  +   K F+   +       ++ ++
Sbjct: 157 LCFLGTLCSSLYSLYSQYGKP-RAWNLQALQVYFQSIVASKDFIYFIY------CLTFVT 209

Query: 176 DHMGATAKTIVLATAVAFALIPIICWAFENVAKFLRRNFSRSTLYRKYLEEPCVWVESNN 235
            H+            + FALIPI+CW+FE+VAKFLRRNFSRSTLYRKYLEEPCVWVESNN
Sbjct: 210 SHL-----------CLKFALIPILCWSFEHVAKFLRRNFSRSTLYRKYLEEPCVWVESNN 258

Query: 236 MTLNILTSHAE 246
            TLNILTSHAE
Sbjct: 259 STLNILTSHAE 269


>Glyma19g05460.1 
          Length = 345

 Score =  215 bits (548), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/251 (49%), Positives = 144/251 (57%), Gaps = 23/251 (9%)

Query: 1   MASRSDVVSHYKRKFYQRHVDPDLVVEPMNFGXXXXXXXXXXXXXXXXXXXXNDQ--VXX 58
           MASR DVVSH+KRKFYQR+VDPDLVVEPM+ G                    N+Q     
Sbjct: 37  MASRDDVVSHFKRKFYQRYVDPDLVVEPMSVGGSSSQPTRSSTTSSSSSPPTNNQPRARS 96

Query: 59  XXXXXXXXXXXXXXXXXPNSTPLRWDRQTILFSVNAWXXXXXXXXXXXXXXRHLSQRAYR 118
                            P+ TPLRWDRQT+LFSV AW              +HLS RAYR
Sbjct: 97  SGSTNRTSGTSTTAGPGPSPTPLRWDRQTVLFSVYAWVFVVAFLAAIPLVPKHLSHRAYR 156

Query: 119 LSFMGTTCSSLYSLYSQYGIMFDEVNLLKLTSNFDEV---KLFLRGKWDRKLPKVISNIS 175
           L F+GT CSSLYSLYSQYG      NL  L   F  +   K F+           ++ ++
Sbjct: 157 LCFLGTLCSSLYSLYSQYGKP-RAWNLQALQVYFQSIVASKDFI------YFIYCLTFVT 209

Query: 176 DHMGATAKTIVLATAVAFALIPIICWAFENVAKFLRRNFSRSTLYRKYLEEPCVWVESNN 235
            H+            + FALIPI+CW+FE+VAKFLRRNFSRSTLYRKYLEEPCVWVESNN
Sbjct: 210 SHL-----------CLKFALIPILCWSFEHVAKFLRRNFSRSTLYRKYLEEPCVWVESNN 258

Query: 236 MTLNILTSHAE 246
            TLNILTSHAE
Sbjct: 259 STLNILTSHAE 269


>Glyma19g05460.2 
          Length = 343

 Score =  215 bits (548), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/251 (49%), Positives = 144/251 (57%), Gaps = 23/251 (9%)

Query: 1   MASRSDVVSHYKRKFYQRHVDPDLVVEPMNFGXXXXXXXXXXXXXXXXXXXXNDQ--VXX 58
           MASR DVVSH+KRKFYQR+VDPDLVVEPM+ G                    N+Q     
Sbjct: 37  MASRDDVVSHFKRKFYQRYVDPDLVVEPMSVGGSSSQPTRSSTTSSSSSPPTNNQPRARS 96

Query: 59  XXXXXXXXXXXXXXXXXPNSTPLRWDRQTILFSVNAWXXXXXXXXXXXXXXRHLSQRAYR 118
                            P+ TPLRWDRQT+LFSV AW              +HLS RAYR
Sbjct: 97  SGSTNRTSGTSTTAGPGPSPTPLRWDRQTVLFSVYAWVFVVAFLAAIPLVPKHLSHRAYR 156

Query: 119 LSFMGTTCSSLYSLYSQYGIMFDEVNLLKLTSNFDEV---KLFLRGKWDRKLPKVISNIS 175
           L F+GT CSSLYSLYSQYG      NL  L   F  +   K F+           ++ ++
Sbjct: 157 LCFLGTLCSSLYSLYSQYGKP-RAWNLQALQVYFQSIVASKDFI------YFIYCLTFVT 209

Query: 176 DHMGATAKTIVLATAVAFALIPIICWAFENVAKFLRRNFSRSTLYRKYLEEPCVWVESNN 235
            H+            + FALIPI+CW+FE+VAKFLRRNFSRSTLYRKYLEEPCVWVESNN
Sbjct: 210 SHL-----------CLKFALIPILCWSFEHVAKFLRRNFSRSTLYRKYLEEPCVWVESNN 258

Query: 236 MTLNILTSHAE 246
            TLNILTSHAE
Sbjct: 259 STLNILTSHAE 269


>Glyma13g07400.1 
          Length = 396

 Score =  211 bits (536), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/250 (48%), Positives = 142/250 (56%), Gaps = 22/250 (8%)

Query: 1   MASRSDVVSHYKRKFYQRHVDPDLVVEPMNFGXXXXXXXXXXXXXXXXXXXXND-QVXXX 59
           MASR DVVSH+KRKFYQR+VDPD VVEPM+ G                    N  +    
Sbjct: 59  MASRDDVVSHFKRKFYQRYVDPDFVVEPMSVGGSSSQPVRSSTTSSSSPLTNNQPRARSS 118

Query: 60  XXXXXXXXXXXXXXXXPNSTPLRWDRQTILFSVNAWXXXXXXXXXXXXXXRHLSQRAYRL 119
                           P+ TPLRWDRQT+LFSVNAW              +HLS RAYRL
Sbjct: 119 GSTNRTSGTSTTAGPGPSPTPLRWDRQTVLFSVNAWVFVVAFLAAIPLVPKHLSHRAYRL 178

Query: 120 SFMGTTCSSLYSLYSQYGIMFDEVNLLKLTSNFDEV---KLFLRGKWDRKLPKVISNISD 176
            F+GT CSSLYSLYSQYG      N   L   F  +   K FL           ++ ++ 
Sbjct: 179 CFLGTLCSSLYSLYSQYGKP-RAWNWQALQVYFQSIIASKDFL------YFIYCLTFVTS 231

Query: 177 HMGATAKTIVLATAVAFALIPIICWAFENVAKFLRRNFSRSTLYRKYLEEPCVWVESNNM 236
           H+            + FALIPI+CW+FE+VAKFLRRNFSRSTLYRKYLEEPCVWVESN+ 
Sbjct: 232 HL-----------CLKFALIPILCWSFEHVAKFLRRNFSRSTLYRKYLEEPCVWVESNSS 280

Query: 237 TLNILTSHAE 246
           TLNI+TSHAE
Sbjct: 281 TLNIVTSHAE 290


>Glyma13g07400.2 
          Length = 366

 Score =  211 bits (536), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/250 (48%), Positives = 142/250 (56%), Gaps = 22/250 (8%)

Query: 1   MASRSDVVSHYKRKFYQRHVDPDLVVEPMNFGXXXXXXXXXXXXXXXXXXXXND-QVXXX 59
           MASR DVVSH+KRKFYQR+VDPD VVEPM+ G                    N  +    
Sbjct: 59  MASRDDVVSHFKRKFYQRYVDPDFVVEPMSVGGSSSQPVRSSTTSSSSPLTNNQPRARSS 118

Query: 60  XXXXXXXXXXXXXXXXPNSTPLRWDRQTILFSVNAWXXXXXXXXXXXXXXRHLSQRAYRL 119
                           P+ TPLRWDRQT+LFSVNAW              +HLS RAYRL
Sbjct: 119 GSTNRTSGTSTTAGPGPSPTPLRWDRQTVLFSVNAWVFVVAFLAAIPLVPKHLSHRAYRL 178

Query: 120 SFMGTTCSSLYSLYSQYGIMFDEVNLLKLTSNFDEV---KLFLRGKWDRKLPKVISNISD 176
            F+GT CSSLYSLYSQYG      N   L   F  +   K FL           ++ ++ 
Sbjct: 179 CFLGTLCSSLYSLYSQYGKP-RAWNWQALQVYFQSIIASKDFL------YFIYCLTFVTS 231

Query: 177 HMGATAKTIVLATAVAFALIPIICWAFENVAKFLRRNFSRSTLYRKYLEEPCVWVESNNM 236
           H+            + FALIPI+CW+FE+VAKFLRRNFSRSTLYRKYLEEPCVWVESN+ 
Sbjct: 232 HL-----------CLKFALIPILCWSFEHVAKFLRRNFSRSTLYRKYLEEPCVWVESNSS 280

Query: 237 TLNILTSHAE 246
           TLNI+TSHAE
Sbjct: 281 TLNIVTSHAE 290


>Glyma19g05820.1 
          Length = 318

 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 64/142 (45%), Gaps = 28/142 (19%)

Query: 81  LRWDRQTILFSVNAWXXXXXXXXXXXXXXRHLSQRAYRLSFMGTTCSS-----------L 129
           + WDRQT+LF V AW              +HLS R YRL F+GT CSS           L
Sbjct: 51  VHWDRQTVLFFVYAWVFVVAFLAVIPLVPKHLSHRTYRLCFLGTLCSSCTHSKSLEFAGL 110

Query: 130 YSLYSQYGIMFDEVNLLKLTSNFDEVKLFLRGKWDRKLPKVISNISDHMGATAKTIVLAT 189
            SL S     F    +L L S      L  R    ++ P+  S++               
Sbjct: 111 ASLLSVNNC-FKGFYILHLLSYICYTLLQKRLS-TQRWPRCTSHL--------------- 153

Query: 190 AVAFALIPIICWAFENVAKFLR 211
            + FALIPI+CW+FE+VAKF R
Sbjct: 154 CLKFALIPILCWSFEHVAKFHR 175