Miyakogusa Predicted Gene

Lj2g3v0156840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0156840.1 tr|G7LAL7|G7LAL7_MEDTR 40S ribosomal protein S2
OS=Medicago truncatula GN=MTR_8g105340 PE=3 SV=1,97.03,0,seg,NULL;
RIBOSOMAL_S5,Ribosomal protein S5, N-terminal, conserved site;
Ribosomal_S5,Ribosomal prot,CUFF.34330.1
         (320 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g34570.1                                                       472   e-133
Glyma11g02250.1                                                       469   e-132
Glyma11g02190.1                                                       469   e-132
Glyma02g09370.1                                                       462   e-130
Glyma08g05090.1                                                       254   9e-68
Glyma13g24640.1                                                        77   3e-14
Glyma07g31830.1                                                        74   2e-13

>Glyma05g34570.1 
          Length = 272

 Score =  472 bits (1215), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 229/235 (97%), Positives = 233/235 (99%)

Query: 86  EEEKWVPVTKLGRLVRDGKIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKIMPVQKQ 145
           EEEKWVPVTKLGRLV++GKIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKIMPVQKQ
Sbjct: 38  EEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKIMPVQKQ 97

Query: 146 TRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIG 205
           TRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRG IILAKLSVIPVRRGYWGNKIG
Sbjct: 98  TRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIG 157

Query: 206 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 265
           KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN
Sbjct: 158 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 217

Query: 266 FVKATFDCLLKTYGFLTPEFWKETRFTKSPFQEYTDLLAKPTAKALILEEERVDA 320
           FVKATFDCLLKTYGFLTPEFWKETRF+KSPFQEYTDLLAKPT KALILEEERV+A
Sbjct: 218 FVKATFDCLLKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTGKALILEEERVEA 272


>Glyma11g02250.1 
          Length = 275

 Score =  469 bits (1206), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 226/236 (95%), Positives = 232/236 (98%)

Query: 85  DEEEKWVPVTKLGRLVRDGKIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKIMPVQK 144
           +EEEKWVPVTKLGRLV++G+IRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKI PVQK
Sbjct: 40  EEEEKWVPVTKLGRLVKEGRIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKITPVQK 99

Query: 145 QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKI 204
           QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRG IILAKLSVIPVRRGYWGNKI
Sbjct: 100 QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI 159

Query: 205 GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG 264
           GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG
Sbjct: 160 GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG 219

Query: 265 NFVKATFDCLLKTYGFLTPEFWKETRFTKSPFQEYTDLLAKPTAKALILEEERVDA 320
           NFVKATFDCL+KTYGFLTPEFWKETRF+KSPFQEYTDLLAKPT K LILEEERVDA
Sbjct: 220 NFVKATFDCLMKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTGKTLILEEERVDA 275


>Glyma11g02190.1 
          Length = 275

 Score =  469 bits (1206), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 226/236 (95%), Positives = 232/236 (98%)

Query: 85  DEEEKWVPVTKLGRLVRDGKIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKIMPVQK 144
           +EEEKWVPVTKLGRLV++G+IRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKI PVQK
Sbjct: 40  EEEEKWVPVTKLGRLVKEGRIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKITPVQK 99

Query: 145 QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKI 204
           QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRG IILAKLSVIPVRRGYWGNKI
Sbjct: 100 QTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKI 159

Query: 205 GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG 264
           GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG
Sbjct: 160 GKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLG 219

Query: 265 NFVKATFDCLLKTYGFLTPEFWKETRFTKSPFQEYTDLLAKPTAKALILEEERVDA 320
           NFVKATFDCL+KTYGFLTPEFWKETRF+KSPFQEYTDLLAKPT K LILEEERVDA
Sbjct: 220 NFVKATFDCLMKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTGKTLILEEERVDA 275


>Glyma02g09370.1 
          Length = 275

 Score =  462 bits (1188), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 223/232 (96%), Positives = 228/232 (98%)

Query: 89  KWVPVTKLGRLVRDGKIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKIMPVQKQTRA 148
           KWVPVTKLGRLV++G+IRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKI PVQKQTRA
Sbjct: 44  KWVPVTKLGRLVKEGRIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKITPVQKQTRA 103

Query: 149 GQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPH 208
           GQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRG IILAKLSVIPVRRGYWGNKIGKPH
Sbjct: 104 GQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPH 163

Query: 209 TVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 268
           TVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK
Sbjct: 164 TVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVK 223

Query: 269 ATFDCLLKTYGFLTPEFWKETRFTKSPFQEYTDLLAKPTAKALILEEERVDA 320
           ATFDCL+KTYGFLTPEFWKETRF+KSPFQEYTDLLAKPT K LILEEERVDA
Sbjct: 224 ATFDCLMKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTGKTLILEEERVDA 275


>Glyma08g05090.1 
          Length = 139

 Score =  254 bits (649), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 123/134 (91%), Positives = 127/134 (94%)

Query: 187 LAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQF 246
           + KLSVIPVRRGYWGNKIGKPH VP KVTGKCGSVTVRMVPAPRGSGIVA RVPKKVLQF
Sbjct: 6   VQKLSVIPVRRGYWGNKIGKPHNVPFKVTGKCGSVTVRMVPAPRGSGIVAIRVPKKVLQF 65

Query: 247 AGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETRFTKSPFQEYTDLLAKP 306
           AGID VFTSSRGSTKTLGNFVKATFDCLLK+YGFLT EFWKETRF+KSPFQEYTDLLAKP
Sbjct: 66  AGIDGVFTSSRGSTKTLGNFVKATFDCLLKSYGFLTLEFWKETRFSKSPFQEYTDLLAKP 125

Query: 307 TAKALILEEERVDA 320
           T KALILEEERV+A
Sbjct: 126 TGKALILEEERVEA 139


>Glyma13g24640.1 
          Length = 316

 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 17/165 (10%)

Query: 132 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGGIILAKLS 191
            ++ V+++  V K  + G++ RF+A VVVGD  G VG+GV  +KEV  A++   + A+ +
Sbjct: 160 FEERVVQVRRVTKVVKGGKQLRFRAVVVVGDKKGQVGVGVGKAKEVIAAVQKSAVNARRN 219

Query: 192 VIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDD 251
           +I V        + K  T P +  G  G+  V + PA  G+G++A    + VL+ AG+D+
Sbjct: 220 IIKV-------PMTKYSTFPHRADGDYGAAKVMLRPASPGTGVIAGGSVRIVLEMAGVDN 272

Query: 252 VFTSSRGSTKTLGNFVKAT---------FDCLLKTYGFLTPEFWK 287
                 GS   L N  +AT         F  + +  G    E WK
Sbjct: 273 ALGKQLGSNNALNN-ARATVAAVQKMKQFREVAEERGIPMEELWK 316


>Glyma07g31830.1 
          Length = 300

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 17/165 (10%)

Query: 132 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGGIILAKLS 191
            ++ V+++  V K  + G++ RF+A VVVGD  G VG+GV  +KEV  A++   + A+ +
Sbjct: 144 FEERVVQVRRVTKVVKGGKQLRFRAVVVVGDKKGSVGVGVGKAKEVIAAVQKSAVNARRN 203

Query: 192 VIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDD 251
           +I V        + K  T P +  G  G+  V + PA  G+G++A    + VL+ AG+++
Sbjct: 204 IIKV-------PMTKYSTFPHRADGDYGAAKVMLRPASPGTGVIAGGSVRIVLEMAGVEN 256

Query: 252 VFTSSRGSTKTLGNFVKAT---------FDCLLKTYGFLTPEFWK 287
                 GS   L N  +AT         F  + +  G    E WK
Sbjct: 257 ALGKQLGSNNALNN-ARATVVAVQKMKQFREVAEERGIPMEELWK 300