Miyakogusa Predicted Gene

Lj2g3v0146660.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0146660.1 Non Chatacterized Hit- tr|D7MFT6|D7MFT6_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,37.78,1e-17,seg,NULL,CUFF.34326.1
         (280 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g29440.1                                                       110   2e-24
Glyma07g29440.3                                                       110   2e-24
Glyma07g29440.2                                                       110   2e-24
Glyma20g01280.1                                                        69   7e-12

>Glyma07g29440.1 
          Length = 466

 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/106 (50%), Positives = 73/106 (68%)

Query: 173 GIHDVYVIVPALSTPDNNKVVTLEVYVYARKSSEIGIVEAIVDLLHPGLSSPDLVFTCIT 232
           GI  +Y  V AL  PD+++VV  +VY YARK ++IGI EA+VD L  G+SS DL+  CIT
Sbjct: 223 GIQSLYDAVCALLMPDDDRVVASQVYGYARKFAKIGIAEALVDSLSAGVSSHDLISACIT 282

Query: 233 FKNIAVDDELCNFITVTCGIDAVLRYMNDSGAQGNKVVITDCCTLF 278
            + +AV+DE+C  I    GIDA+LR ++DSG QG+K V   CC+L 
Sbjct: 283 LRAVAVNDEICKSIAEKGGIDALLRCIDDSGEQGDKAVAKVCCSLL 328


>Glyma07g29440.3 
          Length = 463

 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/106 (50%), Positives = 73/106 (68%)

Query: 173 GIHDVYVIVPALSTPDNNKVVTLEVYVYARKSSEIGIVEAIVDLLHPGLSSPDLVFTCIT 232
           GI  +Y  V AL  PD+++VV  +VY YARK ++IGI EA+VD L  G+SS DL+  CIT
Sbjct: 220 GIQSLYDAVCALLMPDDDRVVASQVYGYARKFAKIGIAEALVDSLSAGVSSHDLISACIT 279

Query: 233 FKNIAVDDELCNFITVTCGIDAVLRYMNDSGAQGNKVVITDCCTLF 278
            + +AV+DE+C  I    GIDA+LR ++DSG QG+K V   CC+L 
Sbjct: 280 LRAVAVNDEICKSIAEKGGIDALLRCIDDSGEQGDKAVAKVCCSLL 325


>Glyma07g29440.2 
          Length = 376

 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/106 (50%), Positives = 73/106 (68%)

Query: 173 GIHDVYVIVPALSTPDNNKVVTLEVYVYARKSSEIGIVEAIVDLLHPGLSSPDLVFTCIT 232
           GI  +Y  V AL  PD+++VV  +VY YARK ++IGI EA+VD L  G+SS DL+  CIT
Sbjct: 220 GIQSLYDAVCALLMPDDDRVVASQVYGYARKFAKIGIAEALVDSLSAGVSSHDLISACIT 279

Query: 233 FKNIAVDDELCNFITVTCGIDAVLRYMNDSGAQGNKVVITDCCTLF 278
            + +AV+DE+C  I    GIDA+LR ++DSG QG+K V   CC+L 
Sbjct: 280 LRAVAVNDEICKSIAEKGGIDALLRCIDDSGEQGDKAVAKVCCSLL 325


>Glyma20g01280.1 
          Length = 198

 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 38/55 (69%)

Query: 224 PDLVFTCITFKNIAVDDELCNFITVTCGIDAVLRYMNDSGAQGNKVVITDCCTLF 278
           PDL+  CIT + IAV+DE+C  I    GIDA+LR ++DSG QGNK V   CC+L 
Sbjct: 27  PDLISACITLRAIAVNDEICKSIAEKGGIDAILRRIDDSGEQGNKAVAKVCCSLL 81