Miyakogusa Predicted Gene

Lj2g3v0146570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0146570.1 tr|A9U113|A9U113_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_173097,41.18,0.000000000000002,seg,NULL,CUFF.34268.1
         (187 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g12290.1                                                       256   8e-69
Glyma01g06260.1                                                       256   9e-69
Glyma01g06260.2                                                       166   9e-42

>Glyma02g12290.1 
          Length = 186

 Score =  256 bits (655), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 132/187 (70%), Positives = 143/187 (76%), Gaps = 1/187 (0%)

Query: 1   MSFMKGDLLSRTRKLVKGLAKAEPVWLKAMEQAPPATFPRAGDKIQTITLPEDVYVKKFY 60
           MSFM+GD LSRTRKLVKGLAKA+P WLKAMEQAPPATFPR+  KI TITLPEDVYVKKFY
Sbjct: 1   MSFMRGDFLSRTRKLVKGLAKAQPAWLKAMEQAPPATFPRSAGKIPTITLPEDVYVKKFY 60

Query: 61  KKYPESKYHDPIKFCAFDPPPSRLFALRVLELKEHGISEEQAMSVADTXXXXXXXXXXXX 120
           KKYPESK HD IKF AFDPPPSR+FALRVLELKE GISEEQAM++AD             
Sbjct: 61  KKYPESKSHDAIKFHAFDPPPSRVFALRVLELKEQGISEEQAMAIADMEYLTEKKTKKKA 120

Query: 121 XXXXXXIAHLQGKRXXXXXXXXXIKEIQAEERKYVRDRFFNPKIHEIVKQKKAEAESFRS 180
                 IA LQGKR         IKEIQAEERKYVRDRFFNPK+ EIV+++KAEA + R 
Sbjct: 121 YTRLKEIARLQGKRLPQNPYPSAIKEIQAEERKYVRDRFFNPKMLEIVEKQKAEAAAERL 180

Query: 181 GFRGGDW 187
             RGGDW
Sbjct: 181 S-RGGDW 186


>Glyma01g06260.1 
          Length = 186

 Score =  256 bits (654), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 131/187 (70%), Positives = 142/187 (75%), Gaps = 1/187 (0%)

Query: 1   MSFMKGDLLSRTRKLVKGLAKAEPVWLKAMEQAPPATFPRAGDKIQTITLPEDVYVKKFY 60
           MSFM+GD LSRTRKLVKGLAKA+P WLKAME  PPATFPR+  KI TITLPEDVYVKKFY
Sbjct: 1   MSFMRGDFLSRTRKLVKGLAKAQPAWLKAMEHGPPATFPRSAGKIPTITLPEDVYVKKFY 60

Query: 61  KKYPESKYHDPIKFCAFDPPPSRLFALRVLELKEHGISEEQAMSVADTXXXXXXXXXXXX 120
           KKYPESKYHD IKF AFDPPPSR+FALRVLELKE G+SEEQAM++AD             
Sbjct: 61  KKYPESKYHDAIKFHAFDPPPSRVFALRVLELKEQGVSEEQAMAIADMEYVTEKKAKKKA 120

Query: 121 XXXXXXIAHLQGKRXXXXXXXXXIKEIQAEERKYVRDRFFNPKIHEIVKQKKAEAESFRS 180
                 IA LQGKR         IKEIQAEERKYVRDRFFNPKI EIV+++KAEA + R 
Sbjct: 121 YTRLKEIARLQGKRLPQNPYPSAIKEIQAEERKYVRDRFFNPKILEIVEKQKAEAAAERL 180

Query: 181 GFRGGDW 187
             RGGDW
Sbjct: 181 S-RGGDW 186


>Glyma01g06260.2 
          Length = 145

 Score =  166 bits (421), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 97/187 (51%), Positives = 107/187 (57%), Gaps = 42/187 (22%)

Query: 1   MSFMKGDLLSRTRKLVKGLAKAEPVWLKAMEQAPPATFPRAGDKIQTITLPEDVYVKKFY 60
           MSFM+GD LSRTRKLVKGLAKA+P WLKAMEQ                            
Sbjct: 1   MSFMRGDFLSRTRKLVKGLAKAQPAWLKAMEQ---------------------------- 32

Query: 61  KKYPESKYHDPIKFCAFDPPPSRLFALRVLELKEHGISEEQAMSVADTXXXXXXXXXXXX 120
                        F AFDPPPSR+FALRVLELKE G+SEEQAM++AD             
Sbjct: 33  -------------FHAFDPPPSRVFALRVLELKEQGVSEEQAMAIADMEYVTEKKAKKKA 79

Query: 121 XXXXXXIAHLQGKRXXXXXXXXXIKEIQAEERKYVRDRFFNPKIHEIVKQKKAEAESFRS 180
                 IA LQGKR         IKEIQAEERKYVRDRFFNPKI EIV+++KAEA + R 
Sbjct: 80  YTRLKEIARLQGKRLPQNPYPSAIKEIQAEERKYVRDRFFNPKILEIVEKQKAEAAAERL 139

Query: 181 GFRGGDW 187
             RGGDW
Sbjct: 140 S-RGGDW 145