Miyakogusa Predicted Gene

Lj2g3v0104770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0104770.1 Non Chatacterized Hit- tr|A5B2B3|A5B2B3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,50.55,2e-19,UBN2_3,NULL,CUFF.34207.1
         (107 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g10160.1                                                        94   4e-20
Glyma12g18250.1                                                        93   5e-20
Glyma17g31360.1                                                        91   2e-19
Glyma03g01970.1                                                        90   7e-19
Glyma02g19630.1                                                        89   1e-18
Glyma07g18520.1                                                        89   1e-18
Glyma16g13610.1                                                        75   1e-14
Glyma18g13110.1                                                        71   2e-13
Glyma17g33260.1                                                        64   4e-11
Glyma19g27810.1                                                        55   1e-08
Glyma16g28890.1                                                        50   5e-07
Glyma16g28890.2                                                        50   5e-07

>Glyma10g10160.1 
          Length = 2160

 Score = 93.6 bits (231), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 60/83 (72%)

Query: 23  YAFSGSPKITSEKLNGKNYLSWRDAVDIWFVGQGLSDHLSFKVSDIDASKKDDWKKVDAQ 82
           ++FSG+P IT+ KLN KNY SW  +V++WF+GQG  DHL      + + K+ +W+K+D Q
Sbjct: 792 FSFSGTPTITTAKLNWKNYPSWSASVELWFLGQGHHDHLEKASDSVSSDKRAEWEKLDYQ 851

Query: 83  LVSLLWQSIEPSLMLHFRTYKTC 105
           L ++LWQS+EP ++   R++KTC
Sbjct: 852 LCAVLWQSVEPDILDILRSFKTC 874


>Glyma12g18250.1 
          Length = 946

 Score = 93.2 bits (230), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 42/97 (43%), Positives = 65/97 (67%)

Query: 10  LFFMAKEKKSLVSYAFSGSPKITSEKLNGKNYLSWRDAVDIWFVGQGLSDHLSFKVSDID 69
           +FF  K   S   ++F G+P I + KLN KNYLSW  +V++WF+GQG   HL   ++ + 
Sbjct: 421 IFFWVKMATSGPVFSFFGTPTIATAKLNWKNYLSWSASVELWFLGQGYHGHLEKNINVVP 480

Query: 70  ASKKDDWKKVDAQLVSLLWQSIEPSLMLHFRTYKTCY 106
            +KK +W+KVD QL ++LWQS+E  ++   R++KTC+
Sbjct: 481 NNKKPEWEKVDYQLCAVLWQSVESDVLEILRSFKTCH 517


>Glyma17g31360.1 
          Length = 1478

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 58/83 (69%)

Query: 23  YAFSGSPKITSEKLNGKNYLSWRDAVDIWFVGQGLSDHLSFKVSDIDASKKDDWKKVDAQ 82
           ++FSG+P IT  KLN KNYLSW  +V++WF+GQG  DHL    S +   KK +W+K D Q
Sbjct: 707 FSFSGTPTITIAKLNWKNYLSWSASVELWFLGQGYHDHLEKGASAVPNDKKSEWEKFDFQ 766

Query: 83  LVSLLWQSIEPSLMLHFRTYKTC 105
           L ++LWQ +EP ++   +++KTC
Sbjct: 767 LCAVLWQFVEPDVLEILKSFKTC 789


>Glyma03g01970.1 
          Length = 491

 Score = 89.7 bits (221), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/87 (48%), Positives = 59/87 (67%)

Query: 19  SLVSYAFSGSPKITSEKLNGKNYLSWRDAVDIWFVGQGLSDHLSFKVSDIDASKKDDWKK 78
           S +S   SG+P IT++KLN KNYLSW  +V++ F+GQG  DHL  + S+I A  ++ WK 
Sbjct: 6   STLSSPLSGTPTITTQKLNLKNYLSWSASVELSFLGQGHYDHLEKEASEIPAKNRNQWKT 65

Query: 79  VDAQLVSLLWQSIEPSLMLHFRTYKTC 105
            D QL  +L QSIEP ++   R++KTC
Sbjct: 66  FDFQLCVVLRQSIEPDVLEILRSFKTC 92


>Glyma02g19630.1 
          Length = 1207

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 58/83 (69%)

Query: 23  YAFSGSPKITSEKLNGKNYLSWRDAVDIWFVGQGLSDHLSFKVSDIDASKKDDWKKVDAQ 82
           ++FSG+  IT+ KLN KNY SW  +V++WF+GQG  DHL      +   K+ +W+K+D Q
Sbjct: 8   FSFSGTSTITTAKLNWKNYPSWSASVELWFLGQGHHDHLEKTSDSVSVDKRPEWEKLDYQ 67

Query: 83  LVSLLWQSIEPSLMLHFRTYKTC 105
           L ++LWQS+EP ++   R++K+C
Sbjct: 68  LCAVLWQSVEPDILEILRSFKSC 90


>Glyma07g18520.1 
          Length = 1102

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 60/84 (71%), Gaps = 2/84 (2%)

Query: 23  YAFSGSPKITSEKLNGKNYLSWRDAVDIWFVGQGLSDHLSFKVSD-IDASKKDDWKKVDA 81
           ++FSG+P IT+ KLN KNY SW   V++WF+GQG  DHL  K SD +   K+ +W+K+D 
Sbjct: 8   FSFSGTPTITTAKLNWKNYPSWSATVELWFLGQGHHDHLE-KTSDFVSDDKRAEWEKLDY 66

Query: 82  QLVSLLWQSIEPSLMLHFRTYKTC 105
           QL  +LWQS+EP ++   R++K+C
Sbjct: 67  QLCVVLWQSVEPDILEILRSFKSC 90


>Glyma16g13610.1 
          Length = 2095

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 49/71 (69%)

Query: 35  KLNGKNYLSWRDAVDIWFVGQGLSDHLSFKVSDIDASKKDDWKKVDAQLVSLLWQSIEPS 94
           +LN KNY SW  ++++WF+GQG  DHL      +   K+ +W+K+D QL ++LWQS+EP 
Sbjct: 624 RLNWKNYPSWSASMELWFLGQGHHDHLEKTSDSVSVDKRPEWEKLDYQLCAVLWQSVEPD 683

Query: 95  LMLHFRTYKTC 105
           ++   R++K+C
Sbjct: 684 ILEILRSFKSC 694


>Glyma18g13110.1 
          Length = 409

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 8/104 (7%)

Query: 12  FMAKEKKSL-------VSYAFSGSPKITSEKLNGK-NYLSWRDAVDIWFVGQGLSDHLSF 63
           FMA E  S         +  F+  P I  EKL G  NY +W   V +WF GQG +DHL+ 
Sbjct: 229 FMASETPSTENSLDPTSAMTFTNVPFIPCEKLTGSANYTTWAAIVKLWFHGQGHADHLTA 288

Query: 64  KVSDIDASKKDDWKKVDAQLVSLLWQSIEPSLMLHFRTYKTCYD 107
           KV+DI       W+++D  L ++LW SI  +L + ++ + T Y+
Sbjct: 289 KVTDIPNKDLALWRQIDTSLCNVLWYSIALNLQISYQAFDTGYE 332


>Glyma17g33260.1 
          Length = 1263

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 41/61 (67%)

Query: 23   YAFSGSPKITSEKLNGKNYLSWRDAVDIWFVGQGLSDHLSFKVSDIDASKKDDWKKVDAQ 82
            ++FSG+P IT+ KLN KNY  W  +V++WF+GQG  DHL    + +   K+  W+K+D Q
Sbjct: 1203 FSFSGTPTITTAKLNWKNYPLWSASVELWFLGQGHHDHLEKASNSVPNDKRPKWEKLDYQ 1262

Query: 83   L 83
            L
Sbjct: 1263 L 1263


>Glyma19g27810.1 
          Length = 682

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 25 FSGSPKITSEKLNGKNYLSWRDAVDIWFVGQGLSDHLSFKVSDIDASKK----DDWKKVD 80
          FS +P IT+EKLN KNY  W D+V++W  GQG  DHL   V+++   ++    +D + V 
Sbjct: 19 FSATPTITTEKLNWKNYRFWSDSVELWLRGQGYHDHLEKDVNEVPVIQELFFLEDAQDVF 78

Query: 81 AQLVSLLWQSIE 92
          A  +  L+ S +
Sbjct: 79 ANDIQRLFHSTQ 90


>Glyma16g28890.1 
          Length = 2359

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 4/74 (5%)

Query: 35  KLNGKNYLSWRDAVDIWFVGQGLSDHL--SFKVSDIDASK--KDDWKKVDAQLVSLLWQS 90
           +LNGKNY +W     I+  G+ L  H+  S  V D D +K   D W   DAQ+++ +  S
Sbjct: 535 RLNGKNYSAWAFQFQIFVTGKDLWGHVDGSSPVPDKDTTKVEHDKWTVKDAQVMAWILGS 594

Query: 91  IEPSLMLHFRTYKT 104
           ++P+++L+ R YKT
Sbjct: 595 VDPNIVLNLRPYKT 608


>Glyma16g28890.2 
          Length = 1019

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 4/74 (5%)

Query: 35  KLNGKNYLSWRDAVDIWFVGQGLSDHL--SFKVSDIDASK--KDDWKKVDAQLVSLLWQS 90
           +LNGKNY +W     I+  G+ L  H+  S  V D D +K   D W   DAQ+++ +  S
Sbjct: 699 RLNGKNYSAWAFQFQIFVTGKDLWGHVDGSSPVPDKDTTKVEHDKWTVKDAQVMAWILGS 758

Query: 91  IEPSLMLHFRTYKT 104
           ++P+++L+ R YKT
Sbjct: 759 VDPNIVLNLRPYKT 772