Miyakogusa Predicted Gene

Lj2g3v0075030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0075030.1 Non Chatacterized Hit- tr|I1ND16|I1ND16_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,36.57,0.000000001,MFMR,G-box binding, MFMR,CUFF.34174.1
         (112 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g01030.1                                                        69   8e-13

>Glyma20g01030.1 
          Length = 298

 Score = 69.3 bits (168), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 64/134 (47%), Gaps = 27/134 (20%)

Query: 1   MATEESNDIGTPCKSVVPQD-ETQNRPLLPDWT-RMQAYYNPGSTQIPLLNPHATGSYLY 58
           M T++SN    P K +VP+D E  +RPL   WT  MQAY   GST  P LN  A GS++ 
Sbjct: 1   MGTQKSNMFDAPFKYMVPEDKEIPDRPLPSHWTPSMQAYNTSGSTPTPFLNQQAAGSHMP 60

Query: 59  HHMTPNQ-------------------------DAALVFSQKVHQNFGKRNLDSKNNCAGN 93
            +M  NQ                         DA L FS+ VH+ FG++NL+S   CA N
Sbjct: 61  LYMWVNQVNNTLLQSDALHDPRMLSSKPTVAGDAVLAFSEIVHRTFGEQNLNSIKKCARN 120

Query: 94  RDGMSMKDFSSTMN 107
               S+    ST N
Sbjct: 121 LQPKSLITKESTEN 134