Miyakogusa Predicted Gene

Lj2g3v0026940.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0026940.1 tr|A9SIB2|A9SIB2_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_165021,67.21,1e-17,SAM/Pointed domain,Sterile alpha
motif/pointed domain; no description,Sterile alpha motif/pointed
do,CUFF.34085.1
         (263 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g40360.1                                                       360   e-100
Glyma06g14420.1                                                       360   1e-99
Glyma06g14420.2                                                       344   5e-95

>Glyma04g40360.1 
          Length = 260

 Score =  360 bits (924), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/261 (69%), Positives = 197/261 (75%), Gaps = 4/261 (1%)

Query: 2   EPGKQGVMVAKILPQQLLNPIEQLQTRFKEVESGFKLWLSKQSIXXXXXXXXXXXXXXXX 61
           + GKQG+MV      Q  NPIEQ+Q RFKE+E+GF+LWLSKQS+                
Sbjct: 3   QAGKQGIMVTS----QSQNPIEQIQARFKELETGFRLWLSKQSLPVEAAVVTTTSAAQGA 58

Query: 62  XIGAFMGTLTGDASSPFPTPPPNASLNPQAMASLNQAQALAGGPLVQARNFAVMTGVNAG 121
            IGAFMGTLT DASS FPTPPPNASLNPQAMASL QAQALAGGPLVQARNFAVMTGVNAG
Sbjct: 59  AIGAFMGTLTADASSTFPTPPPNASLNPQAMASLKQAQALAGGPLVQARNFAVMTGVNAG 118

Query: 122 ITSVLKRIRGKEDVQXXXXXXXXXXXXXXLVSGVGGPNQAANAVTSGLFFALVQGGLFQL 181
           I+ VLKRIRGKEDVQ              LVSG+GGPNQA NAVTSGLFFALVQGGLFQ+
Sbjct: 119 ISCVLKRIRGKEDVQSSMAAAFGSGAMFSLVSGMGGPNQATNAVTSGLFFALVQGGLFQI 178

Query: 182 GQKFSQPPVEDTNYVKTRHMLHNLGLQNYEKHFKKGXXXXXXXXXXXXSALRDVKIPPGP 241
           GQKFS PP EDT+Y KTRHML+NLGLQ+YEK+FKKG            SALRDV+IPPGP
Sbjct: 179 GQKFSNPPAEDTHYAKTRHMLNNLGLQSYEKNFKKGLLTDNTLPLLTDSALRDVRIPPGP 238

Query: 242 RLLILDHIQRDPDAKEKRGGR 262
           RLLILDHIQRD D KEKRG R
Sbjct: 239 RLLILDHIQRDADLKEKRGRR 259


>Glyma06g14420.1 
          Length = 260

 Score =  360 bits (923), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 180/261 (68%), Positives = 199/261 (76%), Gaps = 4/261 (1%)

Query: 2   EPGKQGVMVAKILPQQLLNPIEQLQTRFKEVESGFKLWLSKQSIXXXXXXXXXXXXXXXX 61
           + GKQG+MVA     Q  NPIEQ+Q RFK++E+GF+LWLSKQS+                
Sbjct: 3   QAGKQGIMVAS----QSQNPIEQIQARFKDLETGFRLWLSKQSLPVEAAVVTTTSAAQGA 58

Query: 62  XIGAFMGTLTGDASSPFPTPPPNASLNPQAMASLNQAQALAGGPLVQARNFAVMTGVNAG 121
            IGAFMGTLT DASS FPTPPPNASLNPQAMASL QAQALAGGPL+QARNFAVMTGVNAG
Sbjct: 59  AIGAFMGTLTADASSTFPTPPPNASLNPQAMASLKQAQALAGGPLIQARNFAVMTGVNAG 118

Query: 122 ITSVLKRIRGKEDVQXXXXXXXXXXXXXXLVSGVGGPNQAANAVTSGLFFALVQGGLFQL 181
           I+ VLKRIRGKEDVQ              LVSG+GGPNQA NA+TSGLFFALVQGGLFQ+
Sbjct: 119 ISCVLKRIRGKEDVQSSMAAAFGSGALFSLVSGMGGPNQATNALTSGLFFALVQGGLFQI 178

Query: 182 GQKFSQPPVEDTNYVKTRHMLHNLGLQNYEKHFKKGXXXXXXXXXXXXSALRDVKIPPGP 241
           GQKFSQPP EDT+Y KTRHML+NLGLQ+YEK+FKKG            SALRDV+IPPGP
Sbjct: 179 GQKFSQPPAEDTHYAKTRHMLNNLGLQSYEKNFKKGLLTDNTLPLLTDSALRDVRIPPGP 238

Query: 242 RLLILDHIQRDPDAKEKRGGR 262
           RLLILDHIQRD D K+KRG R
Sbjct: 239 RLLILDHIQRDADLKDKRGSR 259


>Glyma06g14420.2 
          Length = 248

 Score =  344 bits (883), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 173/250 (69%), Positives = 191/250 (76%), Gaps = 4/250 (1%)

Query: 2   EPGKQGVMVAKILPQQLLNPIEQLQTRFKEVESGFKLWLSKQSIXXXXXXXXXXXXXXXX 61
           + GKQG+MVA     Q  NPIEQ+Q RFK++E+GF+LWLSKQS+                
Sbjct: 3   QAGKQGIMVAS----QSQNPIEQIQARFKDLETGFRLWLSKQSLPVEAAVVTTTSAAQGA 58

Query: 62  XIGAFMGTLTGDASSPFPTPPPNASLNPQAMASLNQAQALAGGPLVQARNFAVMTGVNAG 121
            IGAFMGTLT DASS FPTPPPNASLNPQAMASL QAQALAGGPL+QARNFAVMTGVNAG
Sbjct: 59  AIGAFMGTLTADASSTFPTPPPNASLNPQAMASLKQAQALAGGPLIQARNFAVMTGVNAG 118

Query: 122 ITSVLKRIRGKEDVQXXXXXXXXXXXXXXLVSGVGGPNQAANAVTSGLFFALVQGGLFQL 181
           I+ VLKRIRGKEDVQ              LVSG+GGPNQA NA+TSGLFFALVQGGLFQ+
Sbjct: 119 ISCVLKRIRGKEDVQSSMAAAFGSGALFSLVSGMGGPNQATNALTSGLFFALVQGGLFQI 178

Query: 182 GQKFSQPPVEDTNYVKTRHMLHNLGLQNYEKHFKKGXXXXXXXXXXXXSALRDVKIPPGP 241
           GQKFSQPP EDT+Y KTRHML+NLGLQ+YEK+FKKG            SALRDV+IPPGP
Sbjct: 179 GQKFSQPPAEDTHYAKTRHMLNNLGLQSYEKNFKKGLLTDNTLPLLTDSALRDVRIPPGP 238

Query: 242 RLLILDHIQR 251
           RLLILDHIQR
Sbjct: 239 RLLILDHIQR 248