Miyakogusa Predicted Gene

Lj1g3v5062660.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5062660.1 Non Chatacterized Hit- tr|I1JS72|I1JS72_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39925
PE,71.74,0,Pumilio-like repeats,Pumilio RNA-binding repeat; ARM
repeat,Armadillo-type fold; PUM,Pumilio RNA-bin,CUFF.34029.1
         (740 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g42410.1                                                      1031   0.0  
Glyma19g45160.1                                                       253   4e-67

>Glyma03g42410.1 
          Length = 771

 Score = 1031 bits (2667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/783 (68%), Positives = 605/783 (77%), Gaps = 58/783 (7%)

Query: 1   MVSVGSK------AMGHHVHDCESHRRNXXXXXXXXXXXXXPNKGGGSS--FHSNKRTFT 52
           MVS+GSK      +MG H  D E  ++               +K GGS+  F SN  T  
Sbjct: 1   MVSIGSKTLVSRSSMGEH--DYEPLKQGKTKRRK--------HKKGGSTHAFDSNSFTSP 50

Query: 53  PA-SRVR-------------------------KQIDPETTTYFSEIANXXXXXXXXXXXX 86
           P  SRVR                         KQ+DPETT YFSEI+N            
Sbjct: 51  PQLSRVRYLLCFPSTFYVFIYLFNLHFLYLCRKQLDPETTQYFSEISNLFESDGVELEDR 110

Query: 87  XXICANALEETRGKEFEIATDYILSHTLETILQGSDVDSLCAFLKTCANDFPSIATDQSG 146
             ICANALEET+GKEFEIATDYILSHTLETILQG DV  LC FL T AN FP IA D+SG
Sbjct: 111 SLICANALEETKGKEFEIATDYILSHTLETILQGCDVHHLCDFLHTSANHFPYIAMDRSG 170

Query: 147 SHVAQTAINSLALHLQD------PLVEDALTIICKV-IAANSVDVMCNCYGSHVLRSLLC 199
           SHVA+T+I SLA+HLQD      PLVE+ALT+ICKV IAANSVDVMCNCYGSHVLR+LLC
Sbjct: 171 SHVAETSIKSLAVHLQDDDDVVRPLVEEALTMICKVVIAANSVDVMCNCYGSHVLRTLLC 230

Query: 200 LCKGVPLDKTGYYMSKSTTALADRFNFKDFPSKKDDAADFQSGYPNLLRSLVSEMLKQAR 259
           LC+GVPLDK+GYY+SKSTT LADR N K+F SKK DA +FQ G+PNLL+SLVS+MLK A+
Sbjct: 231 LCRGVPLDKSGYYLSKSTTVLADRLNSKEFSSKKYDATNFQPGFPNLLKSLVSDMLKHAK 290

Query: 260 KCIKALQVDQFSSLVFQTTLRVLAGNDEELLHVIPVILGCKNQNNAEGNFIETTVVPQLL 319
           KCIK LQVDQFSSLVFQT LRVLAG+DEELLHVIP++LGCK++NNAE NFI T VV +L 
Sbjct: 291 KCIKILQVDQFSSLVFQTVLRVLAGDDEELLHVIPILLGCKDKNNAEDNFIGTRVVAELK 350

Query: 320 SLFKEAEFSHLMEVVLEVSPKALFNELFTKVFRNSLFELSSHQHGNFVVQALISHANNQD 379
           +L KE++FSHLMEVVLEVSP+ALFNELFTKVFRNSLFELSSHQHGNFVVQALIS+A+NQD
Sbjct: 351 NLLKESKFSHLMEVVLEVSPEALFNELFTKVFRNSLFELSSHQHGNFVVQALISYASNQD 410

Query: 380 LMELIYEELAPNMEGLFQMGRSGVVASLIAACERLHVNEHKCCEVLAKTVCLADDSPKWI 439
           LMELI+EEL PN+EGLF+MGRSGVVASL+AA ERLH+NEHKCC+VLA+ VC  D+SPKWI
Sbjct: 411 LMELIWEELGPNLEGLFKMGRSGVVASLVAASERLHINEHKCCQVLAEAVCPVDESPKWI 470

Query: 440 VPRLLFLDSYFTCEDKSNWSWRSGARMNVMGSLILQAIFRFKSEYIQPYITSITSMEATH 499
           VPRLLFLDS FT EDKSNWSW+SG++M+VMGSLILQ +FRF+SE IQPYI SITSMEATH
Sbjct: 471 VPRLLFLDSCFTSEDKSNWSWQSGSKMHVMGSLILQTVFRFRSECIQPYIISITSMEATH 530

Query: 500 VLEAVRDAKGSHVIEAFLCSGASGKQKRRLVTKLQSHFGEVALNSSGAFTIEKCFTSCNL 559
           VLEAV DA+GSHVIEAFLCSGASGKQKRRLVTKLQ HFGEVAL SSGAFTIEKCFT+ NL
Sbjct: 531 VLEAVVDARGSHVIEAFLCSGASGKQKRRLVTKLQGHFGEVALTSSGAFTIEKCFTASNL 590

Query: 560 SLREAIVSEILAVRSELSKTKQGSYLLRRLDVDGYVTSPDHWRSKQTSKESTYKDFYATF 619
           SLREAIVSE+LAVRS+LSK KQGSYLLR+LD+DGY  +PDHWRSKQ SKESTYKDFY  F
Sbjct: 591 SLREAIVSEMLAVRSDLSKAKQGSYLLRKLDIDGYAANPDHWRSKQASKESTYKDFYTMF 650

Query: 620 GSNDTKSSKTDGFLSDTF-SKSNPKTVKEMRKEIDQSLGPAASFLSTDGFXXXXXXXXXX 678
           GS+DTK ++ D FL+DT  +KSN KTVKEMRKEIDQSLG  A FLST  F          
Sbjct: 651 GSSDTKLTENDAFLADTSNNKSNKKTVKEMRKEIDQSLGSGAPFLSTQNFKKNPKKEKHK 710

Query: 679 XXXXAQIGGDD--DNXXXXXXXXXXVESGDDITSNPASKKTLKKRQRDGDVSEVFVKKLK 736
               AQ+ GDD   N          VESG DI    A+KKTLKKR+RD D+SE  +KK+K
Sbjct: 711 SKKNAQVSGDDVNSNRKKKRSNKEKVESGFDI----AAKKTLKKRRRDDDLSEASLKKVK 766

Query: 737 ASD 739
           A +
Sbjct: 767 APN 769


>Glyma19g45160.1 
          Length = 223

 Score =  253 bits (647), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 137/221 (61%), Positives = 152/221 (68%), Gaps = 15/221 (6%)

Query: 507 AKGSHVIEAFLCSGASGKQKRRLVTK------------LQSHFGEVALNSSGAFTIEKCF 554
           A+GSHVIE FLCSGASGK KRRL+TK               HFGEVAL SSGAFTIEKCF
Sbjct: 1   ARGSHVIEGFLCSGASGKHKRRLITKEFIKGMFPTKIVCSWHFGEVALQSSGAFTIEKCF 60

Query: 555 TSCNLSLREAIVSEILAVRSELSKTKQGSYLLRRLDVDGYVTSPDHWRSKQTSKESTYKD 614
           T+ NLSLREAIVSE+LAVRS+LSKTKQGSYLLR+LD+DG+  SPDHWRSKQ S+ESTYKD
Sbjct: 61  TASNLSLREAIVSEMLAVRSDLSKTKQGSYLLRKLDIDGFAASPDHWRSKQASQESTYKD 120

Query: 615 FYATFGSNDTKSSKTDGFLSDTF-SKSNPKTVKEMRKEIDQSLGPAASFLSTDGFXXXXX 673
           FY  FGS+DTK +K   FL+DT  +KSN KTVKEM KEIDQSLG  A FLST  F     
Sbjct: 121 FYTMFGSSDTKLTKNYAFLADTSNNKSNKKTVKEMSKEIDQSLGSGAPFLSTQNFKKNPK 180

Query: 674 XXXXXXXXXAQIGGDDDNX--XXXXXXXXXVESGDDITSNP 712
                    AQ  GDDDN            VESG ++   P
Sbjct: 181 KEKHKSKKNAQTSGDDDNSNRKKKRSNKEKVESGTNLEIIP 221