Miyakogusa Predicted Gene

Lj1g3v5060970.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5060970.1 tr|E3M1D6|E3M1D6_CAERE CRE-RSR-2 protein
OS=Caenorhabditis remanei GN=Cre-rsr-2 PE=4 SV=1,37.41,3e-18,seg,NULL;
coiled-coil,NULL; cwf21,mRNA splicing factor, Cwf21,CUFF.33985.1
         (820 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g29550.1                                                       281   3e-75
Glyma14g16970.1                                                       252   1e-66
Glyma11g18000.1                                                       174   4e-43
Glyma11g18020.1                                                       107   4e-23
Glyma11g18010.1                                                        75   4e-13

>Glyma17g29550.1 
          Length = 507

 Score =  281 bits (718), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 148/207 (71%), Positives = 160/207 (77%), Gaps = 10/207 (4%)

Query: 1   MYNGIGLQTPRGSGTNGYIQSNKFFVRPKTTKVSDNTKGFEADQGTAGVTRKPNKEILDH 60
           MYNGIGLQTPRGSGTNGYIQSNKFFV+PK +KV++N KGFEADQGTAGV+RKPNKEIL+H
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQSNKFFVKPKISKVAENMKGFEADQGTAGVSRKPNKEILEH 60

Query: 61  DRKRQIQLKLVILEDKLTDQGYTDSEIXXXXXXXXXXXXXXXXXXXXTDGG---SNSDKK 117
           DRKRQIQLKL ILEDKL DQGYTD+EI                    TDG    S SDKK
Sbjct: 61  DRKRQIQLKLTILEDKLIDQGYTDAEI-AEKLVEARQNLEAATASEETDGPASVSASDKK 119

Query: 118 ISDTQTHQIAARKEKQMETLKAALGIVSA---EVQEDGIDDGPGNDGKVGANAEGKHNLK 174
           +S+TQTHQIAARKEKQME LKAALGIVS+   E+ EDG  DG GNDGK G N EG  N K
Sbjct: 120 VSNTQTHQIAARKEKQMEALKAALGIVSSEANEINEDGT-DGLGNDGKNGPNVEG--NSK 176

Query: 175 SEHSFLDRDFSLKKQIVEVQKDENAKK 201
            EHSFLDRDFS KKQ+VE QKDEN KK
Sbjct: 177 PEHSFLDRDFSRKKQMVEDQKDENTKK 203



 Score =  124 bits (310), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/241 (42%), Positives = 126/241 (52%), Gaps = 40/241 (16%)

Query: 349 GRLEKQKMKGRVSNDEDSDRDGVRRVSGQDRYVQKVXXXXXXXXXXXXXXXXXXXXXXYG 408
           GRLEKQK +   S+DEDSD+DGVRR  GQDRYV +                         
Sbjct: 287 GRLEKQKTRRHNSDDEDSDKDGVRRALGQDRYVSRGSYTSSNKSSSDSDSDSGSSDHRRE 346

Query: 409 RARKSGTVAKK---GGPREEVKGRGDV----VEKGKSHAKVDGLDSLRKSYGREFTDGSN 461
           + +K G+VA K   G   EE + R +      +KGK  A VD L SL KSYGR+ T GSN
Sbjct: 347 KTKKGGSVAAKKVKGYGMEENRFRDEARDSGADKGKYGANVDALGSLTKSYGRDITKGSN 406

Query: 462 TRSRAMAQANKKINEDRDTEPDTFAKQDGHDRKLGKTESESKSRMYQNKSRERDGYSKSA 521
           +RSR M   N+KI+ DR+ EP T  K D  DRK+   ESE                SKSA
Sbjct: 407 SRSREMTHGNRKIDGDREREPVTVVKHDEDDRKM---ESE----------------SKSA 447

Query: 522 KLGGFDYESSEQRGRNYNRD------------GEDREARRHGRNDNDLREQEQEHRKDKD 569
           +  G D +SSEQRGRNYN+D            GED E RR  ++D++ R  E EH +D D
Sbjct: 448 RFAGPDDDSSEQRGRNYNKDVESHFVGRTARYGEDHETRRRRKDDDNHR--EHEHTRDND 505

Query: 570 D 570
           D
Sbjct: 506 D 506


>Glyma14g16970.1 
          Length = 790

 Score =  252 bits (643), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 234/553 (42%), Positives = 284/553 (51%), Gaps = 111/553 (20%)

Query: 294 NAARRTNKKSGKRHVSDY-------HEGSPMHRPKEGKQHKQTSKRRXXXXXXXXXXXXX 346
           + A+++ KK+ K H   +       HE    H+  EGKQH +  K               
Sbjct: 258 DIAKKSYKKTDKSHRRHFSDDDSDDHEDVSKHKTWEGKQHSKMRKPHDSAVESDVDREEK 317

Query: 347 XXGRLEKQKMKGRVSNDEDSDRDGVRRVSGQDRYVQKVXXXXXXXXXXXXXXXXXXXXXX 406
             GR EKQK K   S+DEDS RDGV+  SGQDRYV++                       
Sbjct: 318 KYGRREKQKTKRHSSDDEDSYRDGVKHASGQDRYVRRGSYTSSNDSSSDSDSDSDSSDHR 377

Query: 407 YGRARKSGTVAKKGGP---REEVKGRGDV----VEKGKSHAKVDGLDSLRKSYGREFTDG 459
           Y + +K G V  K G    REE K R +      EKGK+ A +D LDSL+KSYG +F  G
Sbjct: 378 YEKTKKGGPVVAKKGKGYGREENKFRDEARDSGAEKGKNTANIDALDSLKKSYGTDFAKG 437

Query: 460 SNTRSRAMAQ-ANKKINEDRDTEPDTFAKQDGHDRKLGKTESESKSRMYQNKSRERDGYS 518
           SN+RSR M Q +++KI+ DRD    T  K +  DRK   TESESK               
Sbjct: 438 SNSRSREMTQGSSRKIDGDRDRGAVTLVKHNEDDRK---TESESKL-------------- 480

Query: 519 KSAKLGGFDYESSEQRGRNYNRD------------GEDREARRHGRNDNDLREQEQEHRK 566
             A+L G D +SSEQRGRNYN+D            GED E RRH R+D++ RE E  HR+
Sbjct: 481 --ARLAGHDDDSSEQRGRNYNKDVESHFVGRTARYGEDHETRRHIRDDDNHREHE--HRR 536

Query: 567 DKDDHGERKRGGNED-HTGRKHLRGEIDHGERKHSRDVDDSREGKLKKEEDGLGERKRGR 625
           D D+ GERK G +ED HTGRK  R E D GE+KH +D DDS+E K ++ EDG G+ + GR
Sbjct: 537 DNDNRGERKHGRDEDDHTGRKLAREE-DVGEKKHVKDEDDSKE-KHRRHEDGHGDYRIGR 594

Query: 626 DEADPREGKLKRDEDGLGERKRGRDEDDPREGKLKRDEDGHGERKHGRDEDDHVGRKQSR 685
                   K  RDED LGERK  RDEDD + GK +R ED  GERK+ RDEDD        
Sbjct: 595 --------KHSRDEDDLGERKHARDEDDSK-GKHRRYEDDRGERKNLRDEDDGA------ 639

Query: 686 YADDPREGKLRRDEDGHGERKHGRDEDDHVGRKHFRDEDDHGERKHERDEGDNREVKYRR 745
                             ERK GRDED   GRK  RDE++H ERK  RDE D    K+RR
Sbjct: 640 ------------------ERKRGRDEDYRTGRKQTRDENEHRERKFRRDEDDREGRKFRR 681

Query: 746 YEDGLGERKNSRDEDGHGERKKLKDGDGHWERQRRRDDDYHAERKPRRDGDYHGHGERKQ 805
            ED  GERKN RDED HGERK L+  D   ER                           +
Sbjct: 682 DEDVYGERKNLRDEDVHGERKNLRGEDDDRER---------------------------K 714

Query: 806 HSRDDDGRGERKH 818
           HS+D DGRGERKH
Sbjct: 715 HSKDKDGRGERKH 727



 Score =  236 bits (601), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 122/199 (61%), Positives = 147/199 (73%), Gaps = 7/199 (3%)

Query: 1   MYNGIGLQTPRGSGTNGYIQSNKFFVRPKTTKVSDNTKGFEADQGTAGVTRKPNKEILDH 60
           MYNGIGLQTPRGSGTNGYIQ NKFFV+PK +KV++NTKGFEADQGTAGVTRKPNK+IL+H
Sbjct: 1   MYNGIGLQTPRGSGTNGYIQGNKFFVKPKISKVAENTKGFEADQGTAGVTRKPNKDILEH 60

Query: 61  DRKRQIQLKLVILEDKLTDQGYTDSEIXXXXXXXXXXXXXXXXXXXXTDGG---SNSDKK 117
           DRKRQIQLKL ILEDKL DQGYTD+EI                     DG    S SDKK
Sbjct: 61  DRKRQIQLKLTILEDKLIDQGYTDAEI-AEKLMEARLNLEATAATEEIDGPASVSASDKK 119

Query: 118 ISDTQTHQIAARKEKQMETLKAALGIVSAEVQEDGID--DGPGNDGKVGANAEGKHNLKS 175
           +S+TQTHQIAARKEKQME LKAALGIVS+E  E   D  D  GNDG  G+N E + ++++
Sbjct: 120 VSNTQTHQIAARKEKQMEALKAALGIVSSEANERNADGTDELGNDGGNGSNVE-EISVRN 178

Query: 176 EHSFLDRDFSLKKQIVEVQ 194
           +   + R   L+++++++Q
Sbjct: 179 KWLKIKRMKILRRRVLKIQ 197


>Glyma11g18000.1 
          Length = 119

 Score =  174 bits (440), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 77/87 (88%), Positives = 84/87 (96%)

Query: 1  MYNGIGLQTPRGSGTNGYIQSNKFFVRPKTTKVSDNTKGFEADQGTAGVTRKPNKEILDH 60
          MYNGIGLQTPRGSGTNGYIQSNKFFV+PK +KV++NTKGFEADQGTAGV+RKPNKEIL+H
Sbjct: 1  MYNGIGLQTPRGSGTNGYIQSNKFFVKPKISKVAENTKGFEADQGTAGVSRKPNKEILEH 60

Query: 61 DRKRQIQLKLVILEDKLTDQGYTDSEI 87
          DRKRQIQLKL ILEDKL DQGYTD+EI
Sbjct: 61 DRKRQIQLKLTILEDKLIDQGYTDAEI 87


>Glyma11g18020.1 
          Length = 202

 Score =  107 bits (268), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 102/208 (49%), Positives = 123/208 (59%), Gaps = 31/208 (14%)

Query: 593 DHGERKHSRDVDDSREGKLKKEEDGLGERKRGRDEADPREGKLKRDEDGLGE----RKRG 648
           DHGERKH RD DD R G+    E+ + E+K G+DE DP+E K +R +DGLG+    RK  
Sbjct: 15  DHGERKHGRDEDD-RTGRKHAREEDVREKKHGKDEDDPKE-KHRRHDDGLGDYRMGRKHA 72

Query: 649 RDEDDPREGKLKRDEDGHGERKHGRDEDDHVGRKQSRYADDPREGKLRRDEDGHGERKHG 708
           RDEDD +EGK +R +DG GERK+ RDEDD                          ERK G
Sbjct: 73  RDEDDSKEGKHRRYDDGRGERKNLRDEDDRA------------------------ERKRG 108

Query: 709 RDEDDHVGRKHFRDEDDHGERKHERDEGDNREVKYRRYEDGLGERKNSRDEDGHGERKKL 768
           RDED   GRK  RDED+H ERK  R+E D    K+RR  D  GERKN RD D HGERK L
Sbjct: 109 RDEDYRTGRKQARDEDEHRERKFRRNEDDREGRKFRRDNDVYGERKNLRDGDVHGERKNL 168

Query: 769 KDGDGHWERQRRRDDDYHAERKPRRDGD 796
           ++ D   ER+  +D+D   ERK RRD D
Sbjct: 169 RENDDR-ERKHSKDEDGRGERKHRRDDD 195



 Score =  107 bits (268), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/199 (52%), Positives = 126/199 (63%), Gaps = 20/199 (10%)

Query: 567 DKDDHGERKRGGNED-HTGRKHLRGEIDHGERKHSRDVDDSREGKLKKEEDGLGE----R 621
           D DDHGERK G +ED  TGRKH R E D  E+KH +D DD +E K ++ +DGLG+    R
Sbjct: 12  DNDDHGERKHGRDEDDRTGRKHAR-EEDVREKKHGKDEDDPKE-KHRRHDDGLGDYRMGR 69

Query: 622 KRGRDEADPREGKLKRDEDGLGERKRGRDEDDPREGKLKRDEDGHGERKHGRDEDDHVGR 681
           K  RDE D +EGK +R +DG GERK  RDEDD              ERK GRDED   GR
Sbjct: 70  KHARDEDDSKEGKHRRYDDGRGERKNLRDEDDR------------AERKRGRDEDYRTGR 117

Query: 682 KQSRYADDPREGKLRRDEDGHGERKHGRDEDDHVGRKHFRDEDDHGERKHERDEGDNREV 741
           KQ+R  D+ RE K RR+ED    RK  RD D +  RK+ RD D HGERK+ R E D+RE 
Sbjct: 118 KQARDEDEHRERKFRRNEDDREGRKFRRDNDVYGERKNLRDGDVHGERKNLR-ENDDRER 176

Query: 742 KYRRYEDGLGERKNSRDED 760
           K+ + EDG GERK+ RD+D
Sbjct: 177 KHSKDEDGRGERKHRRDDD 195



 Score = 91.7 bits (226), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/183 (50%), Positives = 108/183 (59%), Gaps = 28/183 (15%)

Query: 662 DEDGHGERKHGRDEDDHVGRKQSRYAD-----------DPREGKLRRDEDGHGE----RK 706
           D D HGERKHGRDEDD  GRK +R  D           DP+E K RR +DG G+    RK
Sbjct: 12  DNDDHGERKHGRDEDDRTGRKHAREEDVREKKHGKDEDDPKE-KHRRHDDGLGDYRMGRK 70

Query: 707 HGRDEDDHVGRKHFRDEDDHGERKHERDEGDNREVKYRRYEDGLGERKNSRDEDGHGERK 766
           H RDEDD    KH R +D  GERK+ RDE D  E K  R ED    RK +RDED H ERK
Sbjct: 71  HARDEDDSKEGKHRRYDDGRGERKNLRDEDDRAERKRGRDEDYRTGRKQARDEDEHRERK 130

Query: 767 KLKDGDGHWERQRRRDDDYHAERKPRRDGDYHGHGERK----------QHSRDDDGRGER 816
             ++ D    R+ RRD+D + ERK  RDGD   HGERK          +HS+D+DGRGER
Sbjct: 131 FRRNEDDREGRKFRRDNDVYGERKNLRDGDV--HGERKNLRENDDRERKHSKDEDGRGER 188

Query: 817 KHK 819
           KH+
Sbjct: 189 KHR 191



 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 84/147 (57%), Gaps = 24/147 (16%)

Query: 542 GEDREARRHGRNDNDLREQ----------EQEHRKDKDDHGERKRGGNEDH-TGRKHLRG 590
           G+ R  R+H R+++D +E           E+++ +D+DD  ERKRG +ED+ TGRK  R 
Sbjct: 63  GDYRMGRKHARDEDDSKEGKHRRYDDGRGERKNLRDEDDRAERKRGRDEDYRTGRKQARD 122

Query: 591 EIDHGERKHSRDVDDSREGKLKKEEDGLGERKRGRDEADPREGKLKRDEDGLGERKRGRD 650
           E +H ERK  R+ DD    K +++ D  GERK              RD D  GERK  R 
Sbjct: 123 EDEHRERKFRRNEDDREGRKFRRDNDVYGERK------------NLRDGDVHGERKNLR- 169

Query: 651 EDDPREGKLKRDEDGHGERKHGRDEDD 677
           E+D RE K  +DEDG GERKH RD+DD
Sbjct: 170 ENDDRERKHSKDEDGRGERKHRRDDDD 196


>Glyma11g18010.1 
          Length = 229

 Score = 74.7 bits (182), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/55 (70%), Positives = 44/55 (80%), Gaps = 4/55 (7%)

Query: 117 KISDTQTHQIAARKEKQMETLKAALGIVSA---EVQEDGIDDGPGNDGKVGANAE 168
           ++S+TQTHQIAARKEKQME LKAALGIVS+   E+ EDG  DG GNDGK G N E
Sbjct: 8   RVSNTQTHQIAARKEKQMEALKAALGIVSSEANEINEDGT-DGLGNDGKNGPNVE 61



 Score = 58.9 bits (141), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 55/96 (57%), Gaps = 6/96 (6%)

Query: 294 NAARRTNKK--SGKRHVSDY----HEGSPMHRPKEGKQHKQTSKRRXXXXXXXXXXXXXX 347
           N AR++ KK  S +RH SD     HE    H+ +EGKQH + +KR               
Sbjct: 128 NFARKSYKKEKSLERHSSDDDSDDHEDVSNHKIREGKQHSKMNKRHDSEEESDVDSEEKK 187

Query: 348 XGRLEKQKMKGRVSNDEDSDRDGVRRVSGQDRYVQK 383
            GRLEKQK +   S+DEDSD+DGVRR  GQDRYV +
Sbjct: 188 YGRLEKQKTRRHNSDDEDSDKDGVRRALGQDRYVSR 223