Miyakogusa Predicted Gene
- Lj1g3v5060720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v5060720.1 tr|A9SNI1|A9SNI1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_165894,30.95,4e-19,seg,NULL; DUF4308,Domain of unknown
function DUF4308,CUFF.33970.1
(170 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g05490.1 185 2e-47
Glyma19g44990.2 182 1e-46
Glyma16g02010.1 182 1e-46
Glyma07g05490.2 170 6e-43
Glyma03g42240.1 169 1e-42
Glyma19g44990.1 142 2e-34
Glyma16g02010.2 142 2e-34
Glyma03g42240.2 117 4e-27
Glyma16g02010.3 102 2e-22
Glyma07g02210.2 89 2e-18
Glyma07g02210.1 89 2e-18
Glyma08g21880.2 88 3e-18
Glyma07g02210.3 83 1e-16
Glyma03g42240.3 81 4e-16
Glyma07g06660.1 78 6e-15
Glyma16g03230.1 77 7e-15
Glyma07g06660.2 74 6e-14
Glyma16g03230.2 74 8e-14
Glyma01g03020.1 67 1e-11
Glyma02g04600.1 64 6e-11
Glyma02g04600.3 64 7e-11
Glyma07g02210.4 60 9e-10
Glyma08g21880.1 60 1e-09
Glyma02g04600.2 57 1e-08
>Glyma07g05490.1
Length = 168
Score = 185 bits (470), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/154 (59%), Positives = 105/154 (68%), Gaps = 10/154 (6%)
Query: 17 FVDGKAPRQSPTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXX 76
+DGKAPRQSP AS QCVS WK TA+CRKVAR VM
Sbjct: 16 LLDGKAPRQSPAASPQCVSLPPPPLHSQNRS---WKTTAYCRKVARKVMAMATGEAPAEA 72
Query: 77 XXXXXXLNGGELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVP 136
E+PE VKT+QE WDKV+DKYAVSSL + G +ALWGS G+ISAIDR+PL+P
Sbjct: 73 TPT-------EVPEIVKTLQETWDKVDDKYAVSSLALVGVIALWGSVGLISAIDRLPLIP 125
Query: 137 GVLEVVGIGYTGWFAYKNLVFKPDREALFRKVKE 170
G+LE+VGIGYTGWF YKN+VFKPDREAL RKVKE
Sbjct: 126 GILEIVGIGYTGWFVYKNIVFKPDREALVRKVKE 159
>Glyma19g44990.2
Length = 169
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/153 (62%), Positives = 103/153 (67%), Gaps = 10/153 (6%)
Query: 18 VDGKAPRQSPTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXXX 77
VD KAP SP S QCVS WK TAFCR++A NVM
Sbjct: 18 VDAKAP--SPRQSPQCVSPPPVHSP--------WKTTAFCRRIASNVMAMATTREAPAAE 67
Query: 78 XXXXXLNGGELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPG 137
L+ E PE VKTIQEAWDKVEDKYAVSSL VAG VAL GSAG+ISAIDR+PL+PG
Sbjct: 68 VATTELSVAETPEIVKTIQEAWDKVEDKYAVSSLAVAGVVALVGSAGMISAIDRLPLIPG 127
Query: 138 VLEVVGIGYTGWFAYKNLVFKPDREALFRKVKE 170
VLEVVGIGY+GWFAYKNL FKPDREA RKVKE
Sbjct: 128 VLEVVGIGYSGWFAYKNLFFKPDREAFLRKVKE 160
>Glyma16g02010.1
Length = 168
Score = 182 bits (462), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 103/152 (67%), Gaps = 10/152 (6%)
Query: 19 DGKAPRQSPTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXXXX 78
D KAPRQSP AS QCVS WK TA+CR +ARNVM
Sbjct: 18 DCKAPRQSPAASPQCVSLPSPLLHSQNCS---WKTTAYCRSIARNVMAMATGEAPAEAAP 74
Query: 79 XXXXLNGGELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGV 138
E+PE VKT+QE WDKV+DKYAVSSL + G VALWGS G+ISAIDR+PL+PG+
Sbjct: 75 T-------EVPEIVKTLQETWDKVDDKYAVSSLALVGVVALWGSVGLISAIDRLPLIPGI 127
Query: 139 LEVVGIGYTGWFAYKNLVFKPDREALFRKVKE 170
LE+VGIGYTGWF YKN+VFKPDREAL RKVKE
Sbjct: 128 LEIVGIGYTGWFVYKNIVFKPDREALVRKVKE 159
>Glyma07g05490.2
Length = 150
Score = 170 bits (431), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 97/145 (66%), Gaps = 10/145 (6%)
Query: 17 FVDGKAPRQSPTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXX 76
+DGKAPRQSP AS QCVS WK TA+CRKVAR VM
Sbjct: 16 LLDGKAPRQSPAASPQCVSLPPPPLHSQNRS---WKTTAYCRKVARKVMAMATGEAPAEA 72
Query: 77 XXXXXXLNGGELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVP 136
E+PE VKT+QE WDKV+DKYAVSSL + G +ALWGS G+ISAIDR+PL+P
Sbjct: 73 TPT-------EVPEIVKTLQETWDKVDDKYAVSSLALVGVIALWGSVGLISAIDRLPLIP 125
Query: 137 GVLEVVGIGYTGWFAYKNLVFKPDR 161
G+LE+VGIGYTGWF YKN+VFKPDR
Sbjct: 126 GILEIVGIGYTGWFVYKNIVFKPDR 150
>Glyma03g42240.1
Length = 171
Score = 169 bits (428), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/145 (60%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
Query: 27 PTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXXXXXXXX-LNG 85
P QCV+ WK TAFCR++ARN M L+
Sbjct: 18 PPTPRQCVTLPTLPPPPFHSQTRPWKTTAFCRRLARNFMAMATTREAAAAEVAATTDLSI 77
Query: 86 GELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIG 145
E PE VKTIQEAWDKVEDKYAVSSL VAG VAL GSAG+ISAIDR+PL+PG+LEVVGIG
Sbjct: 78 AETPEIVKTIQEAWDKVEDKYAVSSLAVAGVVALVGSAGMISAIDRLPLIPGLLEVVGIG 137
Query: 146 YTGWFAYKNLVFKPDREALFRKVKE 170
YTGWFAYKN VFKPDREA RKVKE
Sbjct: 138 YTGWFAYKNFVFKPDREAFLRKVKE 162
>Glyma19g44990.1
Length = 201
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 84/131 (64%), Gaps = 10/131 (7%)
Query: 18 VDGKAPRQSPTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXXX 77
VD KAP SP S QCVS WK TAFCR++A NVM
Sbjct: 18 VDAKAP--SPRQSPQCVSPPPVHSP--------WKTTAFCRRIASNVMAMATTREAPAAE 67
Query: 78 XXXXXLNGGELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPG 137
L+ E PE VKTIQEAWDKVEDKYAVSSL VAG VAL GSAG+ISAIDR+PL+PG
Sbjct: 68 VATTELSVAETPEIVKTIQEAWDKVEDKYAVSSLAVAGVVALVGSAGMISAIDRLPLIPG 127
Query: 138 VLEVVGIGYTG 148
VLEVVGIGY+G
Sbjct: 128 VLEVVGIGYSG 138
>Glyma16g02010.2
Length = 160
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 83/130 (63%), Gaps = 10/130 (7%)
Query: 19 DGKAPRQSPTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXXXX 78
D KAPRQSP AS QCVS WK TA+CR +ARNVM
Sbjct: 18 DCKAPRQSPAASPQCVSLPSPLLHSQNCS---WKTTAYCRSIARNVMAMATGEAPAEAAP 74
Query: 79 XXXXLNGGELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGV 138
E+PE VKT+QE WDKV+DKYAVSSL + G VALWGS G+ISAIDR+PL+PG+
Sbjct: 75 T-------EVPEIVKTLQETWDKVDDKYAVSSLALVGVVALWGSVGLISAIDRLPLIPGI 127
Query: 139 LEVVGIGYTG 148
LE+VGIGYTG
Sbjct: 128 LEIVGIGYTG 137
>Glyma03g42240.2
Length = 150
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 75/145 (51%), Gaps = 22/145 (15%)
Query: 27 PTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXXXXXXXX-LNG 85
P QCV+ WK TAFCR++ARN M L+
Sbjct: 18 PPTPRQCVTLPTLPPPPFHSQTRPWKTTAFCRRLARNFMAMATTREAAAAEVAATTDLSI 77
Query: 86 GELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIG 145
E PE VKTIQEAWDKVEDKYAVSSL VAG VAL GSAG+IS
Sbjct: 78 AETPEIVKTIQEAWDKVEDKYAVSSLAVAGVVALVGSAGMIS------------------ 119
Query: 146 YTGWFAYKNLVFKPDREALFRKVKE 170
WFAYKN VFKPDREA RKVKE
Sbjct: 120 ---WFAYKNFVFKPDREAFLRKVKE 141
>Glyma16g02010.3
Length = 150
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Query: 19 DGKAPRQSPTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXXXX 78
D KAPRQSP AS QCVS WK TA+CR +ARNVM
Sbjct: 18 DCKAPRQSPAASPQCVSLPSPLLHSQNCS---WKTTAYCRSIARNVMAMATGEAPAEAAP 74
Query: 79 XXXXLNGGELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVIS 127
E+PE VKT+QE WDKV+DKYAVSSL + G VALWGS G+IS
Sbjct: 75 T-------EVPEIVKTLQETWDKVDDKYAVSSLALVGVVALWGSVGLIS 116
>Glyma07g02210.2
Length = 145
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 93 KTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGWFAY 152
K++Q WD+ ED+ + LG A A W S +I+AID++PL P VLE+VGI Y+ WF Y
Sbjct: 60 KSVQNIWDQPEDRLGLIGLGFAAVAAFWASTNLIAAIDKLPLFPTVLELVGIFYSVWFTY 119
Query: 153 KNLVFKPDREALFRKVKE 170
+ L+FKPDRE LF+ + +
Sbjct: 120 RYLIFKPDREELFQILNK 137
>Glyma07g02210.1
Length = 145
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 93 KTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGWFAY 152
K++Q WD+ ED+ + LG A A W S +I+AID++PL P VLE+VGI Y+ WF Y
Sbjct: 60 KSVQNIWDQPEDRLGLIGLGFAAVAAFWASTNLIAAIDKLPLFPTVLELVGIFYSVWFTY 119
Query: 153 KNLVFKPDREALFRKVKE 170
+ L+FKPDRE LF+ + +
Sbjct: 120 RYLIFKPDREELFQILNK 137
>Glyma08g21880.2
Length = 145
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 93 KTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGWFAY 152
K++Q WD+ ED+ + LG A A W S +I+AID++P+ P VLE++GI Y+ WF Y
Sbjct: 60 KSVQNVWDQPEDRLGLIGLGFAAIAAFWASTNLIAAIDKLPVFPTVLELIGIFYSVWFTY 119
Query: 153 KNLVFKPDREALFRKVKE 170
+ L+FKPDRE LF+ + +
Sbjct: 120 RYLIFKPDREELFQILNK 137
>Glyma07g02210.3
Length = 128
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%)
Query: 93 KTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGWFAY 152
K++Q WD+ ED+ + LG A A W S +I+AID++PL P VLE+VGI Y+ WF Y
Sbjct: 60 KSVQNIWDQPEDRLGLIGLGFAAVAAFWASTNLIAAIDKLPLFPTVLELVGIFYSVWFTY 119
Query: 153 KNLVFKPDR 161
+ L+FKPDR
Sbjct: 120 RYLIFKPDR 128
>Glyma03g42240.3
Length = 134
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 18 VDGKAPRQSPTASTQCVSXXXXXXXXXXXXXXXWKATAFCRKVARNVMXXXXXXXXXXXX 77
VD K P QCV+ WK TAFCR++ARN M
Sbjct: 14 VDAKPP-----TPRQCVTLPTLPPPPFHSQTRPWKTTAFCRRLARNFMAMATTREAAAAE 68
Query: 78 XXXXX-LNGGELPEFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVIS 127
L+ E PE VKTIQEAWDKVEDKYAVSSL VAG VAL G+++
Sbjct: 69 VAATTDLSIAETPEIVKTIQEAWDKVEDKYAVSSLAVAGVVALATLGGLLT 119
>Glyma07g06660.1
Length = 163
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%)
Query: 90 EFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGW 149
E ++E WD +E+K V G VA+W S+ ++SAI+ +PL+P ++E+VG+GYTGW
Sbjct: 74 EVFTDLKEKWDALENKSTVLLYGGGAIVAIWLSSILVSAINSVPLLPKIMELVGLGYTGW 133
Query: 150 FAYKNLVFKPDREAL 164
F Y+ L+FK R+ L
Sbjct: 134 FVYRYLLFKSSRKEL 148
>Glyma16g03230.1
Length = 163
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%)
Query: 90 EFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGW 149
E ++E WD +E+K V G VA+W S+ ++SAI+ +PL+P ++E+VG+GYTGW
Sbjct: 74 EVFTDLKEKWDALENKSTVLFYGGGALVAVWLSSILVSAINSVPLLPKIMELVGLGYTGW 133
Query: 150 FAYKNLVFKPDREAL 164
F Y+ L+FK R+ L
Sbjct: 134 FVYRYLLFKSSRKEL 148
>Glyma07g06660.2
Length = 158
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%)
Query: 90 EFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGW 149
E ++E WD +E+K V G VA+W S+ ++SAI+ +PL+P ++E+VG+GYTGW
Sbjct: 74 EVFTDLKEKWDALENKSTVLLYGGGAIVAIWLSSILVSAINSVPLLPKIMELVGLGYTGW 133
Query: 150 FAYKNLVFK 158
F Y+ L+FK
Sbjct: 134 FVYRYLLFK 142
>Glyma16g03230.2
Length = 156
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%)
Query: 90 EFVKTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGW 149
E ++E WD +E+K V G VA+W S+ ++SAI+ +PL+P ++E+VG+GYTGW
Sbjct: 74 EVFTDLKEKWDALENKSTVLFYGGGALVAVWLSSILVSAINSVPLLPKIMELVGLGYTGW 133
Query: 150 FAYKNLVFK 158
F Y+ L+FK
Sbjct: 134 FVYRYLLFK 142
>Glyma01g03020.1
Length = 208
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%)
Query: 102 VEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGWFAYKNLVFKPDR 161
+D ++ G VALW ++ VI AID IPL+P +LEVVG+ YT WF + L+FK +R
Sbjct: 129 TDDTGSIVLYGGGALVALWLTSAVIGAIDSIPLIPKLLEVVGLAYTVWFTSRYLLFKQNR 188
Query: 162 EALFRKVKE 170
+ L K++E
Sbjct: 189 DELGAKIEE 197
>Glyma02g04600.1
Length = 200
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 102 VEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGWFAYKNLVFKPDR 161
+D ++ G VALW ++ VI AID IPL P +LEVVG+ YT WF + L+FK +R
Sbjct: 121 TDDTGSIVVYGGGALVALWLTSAVIGAIDSIPLFPKLLEVVGLAYTVWFTSRYLLFKQNR 180
Query: 162 EALFRKVKE 170
+ L K++E
Sbjct: 181 DELGAKIEE 189
>Glyma02g04600.3
Length = 187
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 102 VEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGWFAYKNLVFKPDR 161
+D ++ G VALW ++ VI AID IPL P +LEVVG+ YT WF + L+FK +R
Sbjct: 108 TDDTGSIVVYGGGALVALWLTSAVIGAIDSIPLFPKLLEVVGLAYTVWFTSRYLLFKQNR 167
Query: 162 EALFRKVKE 170
+ L K++E
Sbjct: 168 DELGAKIEE 176
>Glyma07g02210.4
Length = 122
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 93 KTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYT 147
K++Q WD+ ED+ + LG A A W S +I+AID++PL P VLE+VGI Y+
Sbjct: 60 KSVQNIWDQPEDRLGLIGLGFAAVAAFWASTNLIAAIDKLPLFPTVLELVGIFYS 114
>Glyma08g21880.1
Length = 169
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 93 KTIQEAWDKVEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYT 147
K++Q WD+ ED+ + LG A A W S +I+AID++P+ P VLE++GI Y+
Sbjct: 60 KSVQNVWDQPEDRLGLIGLGFAAIAAFWASTNLIAAIDKLPVFPTVLELIGIFYS 114
>Glyma02g04600.2
Length = 180
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 102 VEDKYAVSSLGVAGFVALWGSAGVISAIDRIPLVPGVLEVVGIGYTGWFAYKNLVFK 158
+D ++ G VALW ++ VI AID IPL P +LEVVG+ YT WF + L+FK
Sbjct: 121 TDDTGSIVVYGGGALVALWLTSAVIGAIDSIPLFPKLLEVVGLAYTVWFTSRYLLFK 177