Miyakogusa Predicted Gene

Lj1g3v5038250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5038250.1 tr|A9SYE0|A9SYE0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_137470,33.33,0.000000000000001,N-terminal domain of the
delta subunit of the F1F0-ATP synthase,F1F0 ATP synthase OSCP/delta
subunit,CUFF.33920.1
         (240 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g44720.1                                                       186   2e-47
Glyma17g13930.1                                                        71   1e-12
Glyma05g03340.1                                                        69   6e-12

>Glyma19g44720.1 
          Length = 218

 Score =  186 bits (473), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/243 (51%), Positives = 148/243 (60%), Gaps = 28/243 (11%)

Query: 1   MDPLTTSVSSTLKISPFPP---TNREXXXXXXXXXXXXXXXXQHHVSSAPTVHNLIPKIK 57
           MD L++SVS TL + P P    TNR+                QHHV S  T  N +PK K
Sbjct: 1   MDTLSSSVS-TLNVPPLPSSTFTNRDFYRFKASPTRSQQQQ-QHHVFSTSTP-NFLPKTK 57

Query: 58  TLFLHKXXXXXXXXXXXXXXXXXXXXXXXXFHRNPATGYAAAVIDVAQSTNSLHSVQRDV 117
           T F HK                        FH NPATGYAAA++DVA ++NSLH V  DV
Sbjct: 58  T-FSHKSSPSLPFSPSPLKPKPSSPT----FHPNPATGYAAALVDVAHNSNSLHFVHSDV 112

Query: 118 QRLLTLLQTVNFESFVADPSRIEEVRRQALKRVLEKGNFHRHVVTILKMLLKKNKLGIVQ 177
           QRLL LLQ   F+S                   +E+GNFHRHVV +LKMLLKKNK+GIV+
Sbjct: 113 QRLLKLLQGAKFQS-----------------PAVEQGNFHRHVVALLKMLLKKNKVGIVK 155

Query: 178 QVLQEFERIYDELCGTQVVLVSSEKKMGEDELLGIVKSVQQMSGAVRVKVKNLVPESLAS 237
           +VLQEFERIYD LCGTQ+VLVSS+ KM ED+L GI KSV Q+SGAVRVKV+NLV ES+ S
Sbjct: 156 EVLQEFERIYDRLCGTQMVLVSSKTKMREDQLFGIAKSVHQLSGAVRVKVRNLVQESMPS 215

Query: 238 FAV 240
           FA+
Sbjct: 216 FAM 218


>Glyma17g13930.1 
          Length = 253

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 71/134 (52%), Gaps = 1/134 (0%)

Query: 108 NSLHSVQRDVQRLLTLLQTVNFESFVADPSRIEEVRRQALKRVLEKGNFHRHVVTILKML 167
           N+L +   D++++  +        + ADP+   E +RQ +  + E   F  H    L +L
Sbjct: 88  NTLDATTADIEKIDEIFSDPQVSDYFADPTLAVEKKRQLIDEIAESSEFQPHTRNFLYIL 147

Query: 168 LKKNKLGIVQQVLQEFERIYDELCGTQVVLVSSEKKMGEDELLGIVKSVQQMSGAVRVKV 227
           +   ++ ++ ++ +EFE +Y+ L  T++ +V+S  K+    L  I K VQ+++G   V++
Sbjct: 148 VDAQRIDLINEIAKEFELVYNSLTETELAVVTSVVKLESQHLAQIAKQVQKLTGTKNVRI 207

Query: 228 KNLVPESL-ASFAV 240
           K L+  SL A F V
Sbjct: 208 KTLLDPSLVAGFTV 221


>Glyma05g03340.1 
          Length = 248

 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 71/134 (52%), Gaps = 1/134 (0%)

Query: 108 NSLHSVQRDVQRLLTLLQTVNFESFVADPSRIEEVRRQALKRVLEKGNFHRHVVTILKML 167
           N+L +   D++++  +        + A+P+   E +R+ +  + E   F  H    L +L
Sbjct: 83  NTLDATTADIEKIDEIFSEAQVSDYFANPTLAVEKKRKLIDEIAESSGFQPHTRNFLYIL 142

Query: 168 LKKNKLGIVQQVLQEFERIYDELCGTQVVLVSSEKKMGEDELLGIVKSVQQMSGAVRVKV 227
           +   ++ ++ ++ +EFE +Y+ L  T++ +V+S  K+    L  I K VQ+++G   V++
Sbjct: 143 VDAQRIDLINEIAKEFELVYNSLTDTELAVVTSVVKLESQHLAQIAKQVQKLTGTKNVRI 202

Query: 228 KNLVPESL-ASFAV 240
           K L+  SL A F V
Sbjct: 203 KTLLDPSLVAGFTV 216