Miyakogusa Predicted Gene

Lj1g3v5035000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5035000.1 Non Chatacterized Hit- tr|I1M781|I1M781_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,54.17,0.000001,
,NODE_58029_length_534_cov_10.827715.path1.1
         (61 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g04310.1                                                        57   4e-09
Glyma14g04300.1                                                        53   7e-08
Glyma14g04280.1                                                        52   1e-07

>Glyma14g04310.1 
          Length = 335

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/48 (54%), Positives = 33/48 (68%)

Query: 6   VKKRVPPELNTMKNKDGKTPMDMLHAHHTNLSSEIKDTAKKVAESGMV 53
           V+ RVP EL  M+N  GK P+D+ +  H  LS EIKD AK +AESGM+
Sbjct: 140 VEWRVPGELRRMRNNMGKRPIDVFYEEHKKLSEEIKDAAKGIAESGML 187


>Glyma14g04300.1 
          Length = 341

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 33/48 (68%)

Query: 6   VKKRVPPELNTMKNKDGKTPMDMLHAHHTNLSSEIKDTAKKVAESGMV 53
           V+ +VP EL+ M+N  GK P+D+ +  H  LS EIKD  K ++ESGM+
Sbjct: 124 VELQVPLELSRMRNNMGKRPIDVFYEEHKKLSEEIKDAGKGISESGML 171


>Glyma14g04280.1 
          Length = 329

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/48 (50%), Positives = 31/48 (64%)

Query: 6   VKKRVPPELNTMKNKDGKTPMDMLHAHHTNLSSEIKDTAKKVAESGMV 53
           V+  VP EL  M+N  GK P+D+ +  H  LS EIKD AK +AE GM+
Sbjct: 143 VETCVPRELRRMRNNMGKRPIDVFYEEHKKLSEEIKDAAKGIAEYGML 190