Miyakogusa Predicted Gene

Lj1g3v5021030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5021030.1 Non Chatacterized Hit- tr|D7LXT8|D7LXT8_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,36.65,7e-18,seg,NULL,CUFF.33847.1
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g44000.2                                                       207   5e-54
Glyma19g44000.1                                                       207   5e-54
Glyma03g41410.1                                                       183   8e-47
Glyma19g44000.3                                                       169   1e-42
Glyma13g11370.1                                                        80   1e-15
Glyma03g22410.1                                                        78   4e-15
Glyma08g45830.1                                                        75   3e-14
Glyma18g26140.1                                                        69   3e-12

>Glyma19g44000.2 
          Length = 179

 Score =  207 bits (526), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/181 (66%), Positives = 125/181 (69%), Gaps = 26/181 (14%)

Query: 7   RSGQIPAFGNWDYSNEMPITQYFESARQAGLVNRYSSSSGESDPCNNVRVDHDLYSVDFK 66
           RSGQIPAFGNWDY+NE+PITQYFESARQAGLV RYSSSSGESDP   VR D DLY+VDFK
Sbjct: 3   RSGQIPAFGNWDYANELPITQYFESARQAGLV-RYSSSSGESDP--YVRADRDLYAVDFK 59

Query: 67  KKPLRNMPPSTLRKGMRNRERR---------YPVKEGMNMRKQQGKVWDVTEHPRKH--- 114
           K P+RNMPPSTL+K  RNR RR               MNMRKQ GKV DVTE  RK    
Sbjct: 60  KPPIRNMPPSTLKKATRNRGRRCVVVKEKEKEKESVKMNMRKQ-GKVCDVTEQARKPVTV 118

Query: 115 -------HDGVXXXXX---XXXXXXVDEDLYKIPPELLRRTKRKKMLGFISKCLVPAACV 164
                  HD V              VDEDLYKIPPELLR TKRKKMLGFISKCLVPAACV
Sbjct: 119 SKEMMRLHDAVPRSPLPRGVRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPAACV 178

Query: 165 S 165
           S
Sbjct: 179 S 179


>Glyma19g44000.1 
          Length = 179

 Score =  207 bits (526), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 120/181 (66%), Positives = 125/181 (69%), Gaps = 26/181 (14%)

Query: 7   RSGQIPAFGNWDYSNEMPITQYFESARQAGLVNRYSSSSGESDPCNNVRVDHDLYSVDFK 66
           RSGQIPAFGNWDY+NE+PITQYFESARQAGLV RYSSSSGESDP   VR D DLY+VDFK
Sbjct: 3   RSGQIPAFGNWDYANELPITQYFESARQAGLV-RYSSSSGESDP--YVRADRDLYAVDFK 59

Query: 67  KKPLRNMPPSTLRKGMRNRERR---------YPVKEGMNMRKQQGKVWDVTEHPRKH--- 114
           K P+RNMPPSTL+K  RNR RR               MNMRKQ GKV DVTE  RK    
Sbjct: 60  KPPIRNMPPSTLKKATRNRGRRCVVVKEKEKEKESVKMNMRKQ-GKVCDVTEQARKPVTV 118

Query: 115 -------HDGVXXXXX---XXXXXXVDEDLYKIPPELLRRTKRKKMLGFISKCLVPAACV 164
                  HD V              VDEDLYKIPPELLR TKRKKMLGFISKCLVPAACV
Sbjct: 119 SKEMMRLHDAVPRSPLPRGVRLPKPVDEDLYKIPPELLRTTKRKKMLGFISKCLVPAACV 178

Query: 165 S 165
           S
Sbjct: 179 S 179


>Glyma03g41410.1 
          Length = 154

 Score =  183 bits (464), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 110/160 (68%), Positives = 117/160 (73%), Gaps = 17/160 (10%)

Query: 7   RSGQIPAFGNWDYSNEMPITQYFESARQAGLVNRYSSSSGESDPCNNVRVDHDLYSVDFK 66
           RSGQIPAFGNWDY+NE+PITQYFESARQAGLV RYSSSSGESDP   VR D DLY+VDF 
Sbjct: 3   RSGQIPAFGNWDYANELPITQYFESARQAGLV-RYSSSSGESDPY--VRADRDLYAVDF- 58

Query: 67  KKPLRNMPPSTLRKGMRNRERRYPVKEG--MNMRKQQGKVWDVTEHPRK-----HHDGVX 119
           KKP+RN+PPSTL+K  RNR  +   KE   MNMRK QGKV DVTE  RK     H D   
Sbjct: 59  KKPIRNIPPSTLKKATRNRVVKEREKENVKMNMRK-QGKVCDVTEQARKPVAAMHLDDA- 116

Query: 120 XXXXXXXXXXVDEDLYKIPPELLRRTKR-KKMLGFISKCL 158
                     VDEDLYKIPPELL  TKR KKMLGFISKCL
Sbjct: 117 ---VPRLPKPVDEDLYKIPPELLGTTKRKKKMLGFISKCL 153


>Glyma19g44000.3 
          Length = 167

 Score =  169 bits (428), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/163 (62%), Positives = 107/163 (65%), Gaps = 26/163 (15%)

Query: 7   RSGQIPAFGNWDYSNEMPITQYFESARQAGLVNRYSSSSGESDPCNNVRVDHDLYSVDFK 66
           RSGQIPAFGNWDY+NE+PITQYFESARQAGLV RYSSSSGESDP   VR D DLY+VDFK
Sbjct: 3   RSGQIPAFGNWDYANELPITQYFESARQAGLV-RYSSSSGESDPY--VRADRDLYAVDFK 59

Query: 67  KKPLRNMPPSTLRKGMRNRERR---------YPVKEGMNMRKQQGKVWDVTEHPRKH--- 114
           K P+RNMPPSTL+K  RNR RR               MNMRK QGKV DVTE  RK    
Sbjct: 60  KPPIRNMPPSTLKKATRNRGRRCVVVKEKEKEKESVKMNMRK-QGKVCDVTEQARKPVTV 118

Query: 115 -------HDGVXXX---XXXXXXXXVDEDLYKIPPELLRRTKR 147
                  HD V              VDEDLYKIPPELLR TKR
Sbjct: 119 SKEMMRLHDAVPRSPLPRGVRLPKPVDEDLYKIPPELLRTTKR 161


>Glyma13g11370.1 
          Length = 146

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 83/166 (50%), Gaps = 21/166 (12%)

Query: 1   MDDYCKRSGQIPAFGNWDYSNEMPITQYFESARQAGLVNRYSSSSGESDPCNNVRVDHDL 60
           M++Y  +   +PAFG+WD+++ +P TQ FESARQAGL+ RY  S  E     ++ V  DL
Sbjct: 1   MEEYYYQRHHVPAFGSWDWNDNLPFTQCFESARQAGLL-RYGYSESED---RDLYVTGDL 56

Query: 61  YSVDFKKKPLRNMPPSTLRKGMRNRERRYPVKEGMNMRKQQGKVWDVTEHPRKHHDGVXX 120
           Y  DF K  +  +P        R RE+     E     K+Q  V +V E P         
Sbjct: 57  YENDFVKPAVIVVP--------RRREKVRCQNE--KDEKKQNWVSNVKELP-----SPTS 101

Query: 121 XXXXXXXXXVDEDLYKIPPELLRRTKRKKM-LGFISKCLVPAACVS 165
                    VDEDLYKI PELL    RKK  L F   CL+P  C++
Sbjct: 102 PIQRPKPKPVDEDLYKISPELLYAKNRKKRGLCFFPSCLMP-TCIA 146


>Glyma03g22410.1 
          Length = 146

 Score = 77.8 bits (190), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 25/168 (14%)

Query: 1   MDDYCKRSGQIPAFGNWDYSNEMPITQYFESARQAGLVNRYSSSSGESDPCNNVRVDHDL 60
           M+ Y  +   +PAFG+WD+++ +P TQ FE+ARQAGL+ RYS S  E     ++ V  DL
Sbjct: 1   MEAYYYKRHHVPAFGSWDWNDNLPFTQCFETARQAGLL-RYSYSESED---RDLYVTGDL 56

Query: 61  YSVDFKKKPLRNMPPSTLRKGMRNRERRYPVKEGMNMRKQQGKVW--DVTEHPRKHHDGV 118
           Y  D     +  +P        R RE+        N ++ + + W  +V E P       
Sbjct: 57  YENDVVTPAMIVVP--------RRREK----VRCQNEKEAKKQSWRSNVKELP-----SP 99

Query: 119 XXXXXXXXXXXVDEDLYKIPPELL-RRTKRKKMLGFISKCLVPAACVS 165
                      VDEDLYKI PELL  +T++K+ L F   CL+P  C++
Sbjct: 100 TSPIQRPKPKPVDEDLYKISPELLYAKTRKKRGLCFFPSCLIP-TCIA 146


>Glyma08g45830.1 
          Length = 140

 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 88/167 (52%), Gaps = 29/167 (17%)

Query: 1   MDDYCKRSGQIPAFGNWDYSNEMPITQYFESARQAGLVNRYSSSSGESDPCNNVRVDHDL 60
           M+++  +  Q+PAFG+WD+++ +P TQ FESARQAGL+   + S  E     ++ V  DL
Sbjct: 1   MEEWYYKKSQVPAFGSWDWNDNLPFTQCFESARQAGLLRCSNYSESEE---RDLYVTGDL 57

Query: 61  YSVDFKKKPLRNMPPSTLRKGMRNRERRYPVK-EGMNMRKQQGKVWDVTEHPRKHHDGVX 119
           Y  +        + P+ +    R ++++  +K + ++M+ + G     T  PR       
Sbjct: 58  YENNV-------VTPAMIVVPRRRQKKKVNIKIQELSMKMEAGP----TPLPRPTSK--- 103

Query: 120 XXXXXXXXXXVDEDLYKIPPELL-RRTKRKKMLGFISKCLVPAACVS 165
                     VDEDLYKI P L+  + K+K+ L F S CL+P  C++
Sbjct: 104 ---------PVDEDLYKISPGLVYAKAKKKRGLCFFSSCLLP-TCIA 140


>Glyma18g26140.1 
          Length = 147

 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 76/160 (47%), Gaps = 20/160 (12%)

Query: 7   RSGQIPAFGNWDYSNEMPITQYFESARQAGLVNRYSSSSGESDPCNNVRVDHDLYSVDFK 66
           +  Q+PAFG+WD+++ +  TQ FESARQAGL+    S S E D    + V  DLY  +  
Sbjct: 7   KKSQVPAFGSWDWNDNLHFTQCFESARQAGLLRCSYSESEERD----LYVTGDLYENNVV 62

Query: 67  KKPLRNMPPSTLRKGMRNRERRYPVKEGMNMRKQQGKVWDVTEHPRKHHDGVXXXXXXXX 126
              +  +P            RR  V   ++  +++ K+ +                    
Sbjct: 63  TPAMIVVP-----------RRRAKV---VDQHEKETKLKNWISDDVDSEPPSPTPLPRPT 108

Query: 127 XXXVDEDLYKIPPELL-RRTKRKKMLGFISKCLVPAACVS 165
              VDEDLYKI P LL  + K+K+ L F S CL+P  CV+
Sbjct: 109 SKPVDEDLYKISPGLLYAKAKKKRGLCFFSSCLLP-TCVA 147