Miyakogusa Predicted Gene

Lj1g3v5020810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v5020810.1 Non Chatacterized Hit- tr|D8R8L6|D8R8L6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,56.47,3e-19,CMYCBINDINGP,NULL; coiled-coil,NULL; SUBFAMILY NOT
NAMED,NULL; ASSOCIATE OF C-MYC (AMY-1),Associate ,CUFF.33830.1
         (116 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g41240.1                                                       176   5e-45
Glyma19g43860.1                                                        80   4e-16

>Glyma03g41240.1 
          Length = 116

 Score =  176 bits (446), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 86/99 (86%), Positives = 93/99 (93%)

Query: 18  YLESSGAVDALTKVLVALYEQNDKPSSALEFIQQKLSCPSISEYEKLQAEFSDLQIRYNE 77
           YLE+SGAVDALTKVLV+LYEQNDKPSSA+EFIQQKLSCPSISEYEKLQAEFSDLQI+YN+
Sbjct: 18  YLETSGAVDALTKVLVSLYEQNDKPSSAVEFIQQKLSCPSISEYEKLQAEFSDLQIKYND 77

Query: 78  LLAAHHTTCKELEEMKSSHALAMASSKETTDIEPPKDVL 116
           LLAAH  TCKELEEMK+SHALA AS+KETTD E PKD L
Sbjct: 78  LLAAHQKTCKELEEMKNSHALATASTKETTDSESPKDGL 116


>Glyma19g43860.1 
          Length = 76

 Score = 80.1 bits (196), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 36/42 (85%), Positives = 40/42 (95%)

Query: 48 FIQQKLSCPSISEYEKLQAEFSDLQIRYNELLAAHHTTCKEL 89
          FIQQKLSCPSIS YEKL+AEFSDLQI+YN+LLAAHH TCKE+
Sbjct: 1  FIQQKLSCPSISVYEKLKAEFSDLQIKYNDLLAAHHKTCKEV 42