Miyakogusa Predicted Gene

Lj1g3v4996190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4996190.1 tr|B9MZB6|B9MZB6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_810462 PE=4
SV=1,82,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; no
description,NULL,CUFF.33909.1
         (105 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g43510.1                                                       105   1e-23
Glyma03g40810.1                                                        93   6e-20
Glyma15g19830.1                                                        61   3e-10

>Glyma19g43510.1 
          Length = 347

 Score =  105 bits (262), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/50 (88%), Positives = 48/50 (96%)

Query: 21  GAALPTNTPGIPCIFDPFGRAGICGDWLLGSNIEAAVLSGVALANHVCHF 70
           GAALPTNTPG+PCIFDPFGRAGICGDWLLGSNIEAAVLSG+ALANH+  +
Sbjct: 249 GAALPTNTPGVPCIFDPFGRAGICGDWLLGSNIEAAVLSGIALANHIADY 298


>Glyma03g40810.1 
          Length = 213

 Score = 93.2 bits (230), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 41/50 (82%), Positives = 45/50 (90%)

Query: 21  GAALPTNTPGIPCIFDPFGRAGICGDWLLGSNIEAAVLSGVALANHVCHF 70
           GA  PTNT G+PCIFDPFGRAGICGDWLLGSNIEAAVLSG+ALANH+  +
Sbjct: 136 GAVFPTNTHGVPCIFDPFGRAGICGDWLLGSNIEAAVLSGIALANHIADY 185


>Glyma15g19830.1 
          Length = 34

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/35 (82%), Positives = 30/35 (85%), Gaps = 1/35 (2%)

Query: 32 PCIFDPFGRAGICGDWLLGSNIEAAVLSGVALANH 66
          PCIFDPFGR GICGDWLLGSNIE  VL  +ALANH
Sbjct: 1  PCIFDPFGRDGICGDWLLGSNIEVVVLR-IALANH 34